C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 415
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170954 ZNF415 9606 - 19:53107879-53133077 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000243643 ZNF415-001 53107879-53132892 protein_coding
  ENST00000421033 ZNF415-201 53107880-53132918 protein_coding
  ENST00000500065 ZNF415-025 53107883-53132888 protein_coding
  ENST00000594011 ZNF415-003 53107880-53132892 protein_coding
  ENST00000594286 ZNF415-024 53115784-53132920 processed_transcript
  ENST00000595174 ZNF415-018 53109692-53129709 protein_coding
  ENST00000595193 ZNF415-002 53107879-53132895 protein_coding
  ENST00000595359 ZNF415-017 53109738-53133077 processed_transcript
  ENST00000595813 ZNF415-011 53109806-53132900 protein_coding
  ENST00000596051 ZNF415-015 53116379-53132900 protein_coding
  ENST00000596106 ZNF415-010 53115757-53132900 processed_transcript
  ENST00000596683 ZNF415-022 53115734-53132892 processed_transcript
  ENST00000597503 ZNF415-004 53107879-53132886 protein_coding
  ENST00000597748 ZNF415-007 53107898-53123649 protein_coding
  ENST00000597877 ZNF415-019 53115847-53129699 nonsense_mediated_decay
  ENST00000598024 ZNF415-023 53115235-53132904 nonsense_mediated_decay
  ENST00000598578 ZNF415-005 53108101-53132881 nonsense_mediated_decay
  ENST00000599261 ZNF415-012 53109877-53132884 protein_coding
  ENST00000600098 ZNF415-014 53116260-53132916 retained_intron
  ENST00000600120 ZNF415-006 53107879-53132875 nonsense_mediated_decay
  ENST00000600574 ZNF415-021 53116105-53132900 protein_coding
  ENST00000601110 ZNF415-013 53109727-53132904 protein_coding
  ENST00000601215 ZNF415-020 53109672-53129665 protein_coding
  ENST00000601493 ZNF415-008 53107879-53132875 protein_coding
  ENST00000602024 ZNF415-009 53109607-53132904 processed_transcript
  ENST00000602110 ZNF415-016 53115258-53132900 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000243643ENST00000421033ENST00000500065ENST00000594011ENST00000595193ENST00000595359ENST00000596106ENST00000597503ENST00000597748ENST00000598578ENST00000599261ENST00000600120ENST00000601110ENST00000601215ENST00000601493ENST00000602024ENST00000602110
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000243643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.749±0.08 0.320±0.00 6.458±0.00
ENST00000421033 N/A N/A N/A N/A 0.754±0.00 0.535±0.00 0.798±0.00 0.788±0.00 N/A N/A N/A N/A 0.493±0.00 N/A
ENST00000500065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.512±0.00 0.174±0.00 N/A
ENST00000594011 0.257±0.00 N/A N/A N/A N/A N/A 0.927±0.00 1.772±0.00 N/A N/A N/A N/A N/A 1.753±0.00
ENST00000595193 N/A 1.078±0.00 N/A 1.569±0.00 0.733±0.00 0.385±0.00 0.738±0.00 N/A N/A N/A N/A N/A 0.534±0.00 1.993±0.00
ENST00000595359 N/A N/A N/A N/A N/A 1.273±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596106 N/A N/A N/A N/A N/A N/A N/A 1.172±0.00 N/A N/A N/A N/A N/A N/A
ENST00000597503 0.844±0.00 0.392±0.00 N/A 1.678±0.00 0.772±0.00 0.400±0.00 N/A N/A 0.092±0.00 0.155±0.00 N/A 0.525±0.00 0.366±0.00 N/A
ENST00000597748 N/A N/A 0.142±0.00 N/A N/A N/A 0.828±0.00 N/A N/A N/A N/A N/A N/A 2.210±0.00
ENST00000598578 N/A N/A N/A 0.949±0.00 N/A N/A N/A N/A 0.778±0.00 0.430±0.00 N/A N/A N/A N/A
ENST00000599261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.502±0.00 N/A N/A N/A
ENST00000600120 N/A N/A N/A 0.861±0.00 N/A N/A N/A N/A N/A 0.147±0.00 N/A 0.743±0.00 N/A 3.058±0.00
ENST00000601110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.988±0.00 N/A N/A N/A
ENST00000601215 N/A N/A 0.646±0.00 N/A N/A N/A 1.239±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000601493 N/A N/A 0.272±0.00 1.036±0.00 0.574±0.00 0.690±0.39 N/A 0.455±0.16 N/A 0.643±0.29 N/A 1.064±0.80 0.389±0.00 N/A
ENST00000602024 N/A N/A N/A N/A N/A N/A N/A N/A 0.359±0.00 1.026±0.00 N/A 0.620±0.11 1.705±0.00 17.270±0.00
ENST00000602110 N/A N/A N/A N/A N/A N/A N/A N/A 0.206±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA:IBA regulation of transcription, DNA-templated
GO:0015630 IDA microtubule cytoskeleton
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000002617 Zfp40 zinc finger protein 40 protein_coding Mus_musculus
ENSMUSG00000023882 Zfp54 zinc finger protein 54 protein_coding Mus_musculus
ENSMUSG00000057409 Zfp53 zinc finger protein 53 protein_coding Mus_musculus
ENSMUSG00000058186 Gm13242 predicted gene 13242 protein_coding Mus_musculus
ENSMUSG00000061544 Zfp229 zinc finger protein 229 protein_coding Mus_musculus
ENSMUSG00000062518 Zfp534 zinc finger protein 534 protein_coding Mus_musculus
ENSMUSG00000062743 Zfp677 zinc finger protein 677 protein_coding Mus_musculus
ENSMUSG00000066007 Zfp600 zinc finger protein 600 protein_coding Mus_musculus
ENSMUSG00000066009 Gm13051 predicted gene 13051 protein_coding Mus_musculus
ENSMUSG00000067919 Rex2 reduced expression 2 protein_coding Mus_musculus
ENSMUSG00000067928 Zfp760 zinc finger protein 760 protein_coding Mus_musculus
ENSMUSG00000067931 Zfp948 zinc finger protein 948 protein_coding Mus_musculus
ENSMUSG00000078498 Gm13151 predicted gene 13151 protein_coding Mus_musculus
ENSMUSG00000078503 Gm13225 predicted gene 13225 protein_coding Mus_musculus
ENSMUSG00000086147 Gm13150 predicted gene 13150 protein_coding Mus_musculus
ENSMUSG00000096433 Gm4944 predicted gene 4944 protein_coding Mus_musculus

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