C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pleiotropic regulator 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171566 PLRG1 9606 - 4:154535006-154550435 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302078 PLRG1-003 154536619-154550397 protein_coding
  ENST00000499023 PLRG1-001 154535006-154550435 protein_coding
  ENST00000503251 PLRG1-012 154536600-154539184 protein_coding
  ENST00000503751 PLRG1-007 154546543-154550400 retained_intron
  ENST00000504341 PLRG1-006 154542231-154549141 protein_coding
  ENST00000506192 PLRG1-002 154540671-154550392 nonsense_mediated_decay
  ENST00000506627 PLRG1-013 154536521-154540936 nonsense_mediated_decay
  ENST00000506918 PLRG1-009 154541958-154545954 retained_intron
  ENST00000507125 PLRG1-010 154539014-154540272 retained_intron
  ENST00000509975 PLRG1-004 154546150-154550394 nonsense_mediated_decay
  ENST00000512719 PLRG1-008 154545853-154550383 retained_intron
  ENST00000512773 PLRG1-011 154536432-154537542 retained_intron
  ENST00000515520 PLRG1-005 154547482-154550396 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302078ENST00000499023ENST00000506192ENST00000506627ENST00000512773ENST00000515520
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302078 3.824±0.00 8.713±0.00 2.510±0.00 3.868±1.48 5.081±1.09 4.448±1.19 7.184±0.00 9.781±0.00 5.551±1.06 3.748±0.58 3.162±2.05 10.744±3.35 9.655±0.99 7.651±2.51
ENST00000499023 1.199±0.00 3.060±0.00 0.856±0.00 5.165±1.02 2.412±0.00 2.213±0.52 1.771±0.70 2.278±1.01 1.926±0.19 2.909±0.00 1.414±0.00 4.529±0.72 2.330±0.47 3.639±0.41
ENST00000506192 3.437±0.00 N/A 1.684±0.00 N/A N/A N/A 1.620±0.00 N/A N/A N/A 6.888±0.00 5.003±0.00 N/A N/A
ENST00000506627 5.379±0.00 8.944±0.00 N/A 2.572±0.00 7.467±0.00 5.029±0.00 N/A 6.212±3.04 5.137±0.00 N/A 1.239±0.00 8.252±0.00 5.654±1.39 7.674±2.29
ENST00000512773 N/A N/A N/A N/A 3.716±0.00 7.309±0.00 N/A N/A 5.305±0.00 6.033±0.00 N/A 7.155±0.00 N/A N/A
ENST00000515520 N/A N/A 4.471±0.00 N/A 3.555±0.00 N/A 2.067±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D1 CIL_0008D1_0001 VISTA 4:154359551-154960904

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000398 IC mRNA splicing, via spliceosome
GO:0003714 TAS transcription corepressor activity
GO:0004871 TAS signal transducer activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005662 IDA DNA replication factor A complex
GO:0007165 TAS signal transduction
GO:0034504 IEA protein localization to nucleus
GO:0071013 IDA catalytic step 2 spliceosome
GO:1900087 IEA positive regulation of G1/S transition of mitotic cell cycle
GO:2001141 TAS regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037283 plrg1 pleiotropic regulator 1 protein_coding Danio_rerio
ENSMUSG00000027998 Plrg1 pleiotropic regulator 1, PRL1 homolog (Arabidopsis) protein_coding Mus_musculus

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