C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleiotropic regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506627 PLRG1-013 ENSG00000171566 9606 - 4:154536521-154540936 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000506627
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000506627 5.379±0.00 8.944±0.00 2.572±0.00 7.467±0.00 5.029±0.00 6.212±3.04 5.137±0.00 1.239±0.00 8.252±0.00 5.654±1.39 7.674±2.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D1 CIL_0008D1_0001 VISTA 4:154359551-154960904

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029628 Plrg1-002 nonsense_mediated_decay Mus_musculus 0 1007
ENSMUST00000122128 Plrg1-003 protein_coding Mus_musculus 0 529
ENSMUST00000150268 Plrg1-001 protein_coding Mus_musculus 0 529
ENSMUST00000151915 Plrg1-004 retained_intron Mus_musculus 0 222

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