C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleiotropic regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000499023 PLRG1-001 ENSG00000171566 9606 - 4:154535006-154550435 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000499023
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000499023 1.199±0.00 3.060±0.00 0.856±0.00 5.165±1.02 2.412±0.00 2.213±0.52 1.771±0.70 2.278±1.01 1.926±0.19 2.909±0.00 1.414±0.00 4.529±0.72 2.330±0.47 3.639±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D1 CIL_0008D1_0001 VISTA 4:154359551-154960904

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000398 IC mRNA splicing, via spliceosome
GO:0003714 TAS transcription corepressor activity
GO:0004871 TAS signal transducer activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005662 IDA DNA replication factor A complex
GO:0007165 TAS signal transduction
GO:0034504 IEA protein localization to nucleus
GO:0071013 IDA catalytic step 2 spliceosome
GO:1900087 IEA positive regulation of G1/S transition of mitotic cell cycle
GO:2001141 TAS regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150268 Plrg1-001 protein_coding Mus_musculus 0 1916
ENSMUST00000122128 Plrg1-003 protein_coding Mus_musculus 0 1502
ENSMUST00000029628 Plrg1-002 nonsense_mediated_decay Mus_musculus 0 1391
ENSMUST00000151915 Plrg1-004 retained_intron Mus_musculus 0 222

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