C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006XF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000030376-ENSDARG00000069619 CGP 7955 1:45843255-46087163
GeneTranscriptPositionBiotype
ENSDARG00000030376 (grin2bb)
glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b 		ENSDART00000092613 (grin2bb-201) 45847163-45998380 protein_coding
ENSDART00000143664 (grin2bb-001) 45843255-46024295 protein_coding
ENSDARG00000069619 (atf7ip)
activating transcription factor 7 interacting protein 		ENSDART00000135089 (atf7ip-001) 46040752-46051480 protein_coding
ENSDART00000148413 (atf7ip-005) 46048363-46085174 protein_coding
ENSDART00000149155 (atf7ip-002) 46040752-46055100 protein_coding
ENSDART00000149725 (atf7ip-006) 46047422-46085011 protein_coding
ENSDART00000149919 (atf7ip-007) 46041449-46042266 retained_intron
ENSDART00000150066 (atf7ip-004) 46048364-46086935 protein_coding
ENSDART00000150165 (atf7ip-003) 46048363-46087163 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006XF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000273079-ENSG00000171681 CGP 9606 12:13537337-14502935
GeneTranscriptPositionBiotype
ENSG00000171681 (ATF7IP)
activating transcription factor 7 interacting protein 		ENST00000261168 (ATF7IP-201) 14365632-14502935 protein_coding
ENST00000396279 (ATF7IP-018) 14419188-14425461 protein_coding
ENST00000428217 (ATF7IP-023) 14419164-14424291 protein_coding
ENST00000534828 (ATF7IP-011) 14367363-14424371 protein_coding
ENST00000535132 (ATF7IP-009) 14367373-14424224 protein_coding
ENST00000535179 (ATF7IP-007) 14466110-14476154 retained_intron
ENST00000535738 (ATF7IP-008) 14478336-14481906 protein_coding
ENST00000536279 (ATF7IP-015) 14419211-14424183 protein_coding
ENST00000536444 (ATF7IP-001) 14365729-14502931 protein_coding
ENST00000537653 (ATF7IP-003) 14365677-14476432 retained_intron
ENST00000538511 (ATF7IP-021) 14365684-14447030 protein_coding
ENST00000539057 (ATF7IP-014) 14416913-14424445 protein_coding
ENST00000539659 (ATF7IP-026) 14365676-14460567 processed_transcript
ENST00000540793 (ATF7IP-024) 14423761-14498247 protein_coding
ENST00000541056 (ATF7IP-013) 14408490-14424423 protein_coding
ENST00000541654 (ATF7IP-027) 14385316-14461021 processed_transcript
ENST00000542508 (ATF7IP-016) 14419971-14424012 protein_coding
ENST00000542514 (ATF7IP-022) 14419193-14424312 protein_coding
ENST00000542967 (ATF7IP-010) 14367324-14424443 protein_coding
ENST00000542991 (ATF7IP-012) 14394863-14424092 protein_coding
ENST00000543189 (ATF7IP-004) 14365693-14482653 protein_coding
ENST00000544627 (ATF7IP-002) 14385064-14498763 protein_coding
ENST00000545723 (ATF7IP-020) 14365688-14438247 protein_coding
ENST00000545769 (ATF7IP-019) 14419136-14424421 protein_coding
ENSG00000200475 (RN7SKP162)
RNA, 7SK small nuclear pseudogene 162 		ENST00000363605 (RN7SKP162-201) 13683542-13683886 misc_RNA
ENSG00000227760 (RP11-298E10.1)
 ENST00000544546 (RP11-298E10.1-001) 14192002-14192284 processed_pseudogene
ENSG00000255749 (GNAI2P1)
guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 pseudogene 1 		ENST00000541815 (GNAI2P1-001) 14254912-14255226 processed_pseudogene
ENSG00000256084 (RP11-134N1.2)
 ENST00000538329 (RP11-134N1.2-001) 14216590-14221297 lincRNA
ENSG00000273079 (GRIN2B)
glutamate receptor, ionotropic, N-methyl D-aspartate 2B 		ENST00000609686 (GRIN2B-001) 13537337-13980119 protein_coding
ENSG00000277935 (RP11-4N23.4)
 ENST00000621825 (RP11-4N23.4-001) 13540231-13544540 lincRNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XF_0001ENSDARG00000030376ENSDART00000092613ENSDART00000143664ENSDARG00000069619ENSDART00000135089ENSDART00000148413ENSDART00000149155ENSDART00000149725ENSDART00000149919ENSDART00000150066ENSDART00000150165CIL_0006XF_0002ENSG00000171681ENST00000261168ENST00000396279ENST00000428217ENST00000534828ENST00000535132ENST00000535179ENST00000535738ENST00000536279ENST00000536444ENST00000537653ENST00000538511ENST00000539057ENST00000539659ENST00000540793ENST00000541056ENST00000541654ENST00000542508ENST00000542514ENST00000542967ENST00000542991ENST00000543189ENST00000544627ENST00000545723ENST00000545769ENSG00000200475ENST00000363605ENSG00000227760ENST00000544546ENSG00000255749ENST00000541815ENSG00000256084ENST00000538329ENSG00000273079ENST00000609686ENSG00000277935ENST00000621825
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XF_0001ENSDARG00000030376ENSDART00000092613ENSDART00000143664ENSDARG00000069619ENSDART00000135089ENSDART00000149155ENSDART00000149725CIL_0006XF_0002ENSG00000171681ENST00000261168ENST00000536444ENST00000537653ENST00000538511ENST00000539659ENST00000540793ENST00000543189ENST00000544627ENSG00000200475ENST00000363605ENSG00000227760ENST00000544546ENSG00000255749ENST00000541815ENSG00000256084ENST00000538329ENSG00000273079ENST00000609686ENSG00000277935ENST00000621825
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000030376 ENSDART00000092613 N/A N/A N/A N/A N/A N/A 0.054±0.00 0.028±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000143664 N/A N/A N/A 7.136±5.49 N/A N/A 0.096±0.00 0.034±0.02 0.025±0.00 N/A 0.733±0.00 N/A N/A N/A
ENSDARG00000069619 ENSDART00000135089 N/A N/A N/A 8.094±7.08 N/A N/A 4.961±4.29 14.798±8.96 0.830±0.00 N/A 5.865±0.00 N/A N/A N/A
ENSDART00000148413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149155 N/A N/A N/A N/A N/A N/A N/A 8.209±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000149725 N/A N/A N/A 14.046±2.74 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171681 ENST00000261168 2.838±0.00 3.072±0.00 2.741±0.00 1.501±0.66 1.663±0.00 1.826±0.21 N/A 1.200±0.00 2.303±1.67 6.910±0.00 1.380±0.00 4.120±1.01 2.106±1.30 3.783±0.00
ENST00000396279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536444 2.065±0.00 N/A N/A 0.554±0.00 1.485±0.00 1.726±0.00 0.725±0.00 2.241±0.00 N/A 0.848±0.00 1.686±0.00 3.792±0.00 1.317±0.00 4.190±0.00
ENST00000537653 N/A N/A N/A 1.390±0.00 3.258±0.00 2.554±0.00 N/A N/A N/A 3.343±0.00 N/A N/A N/A N/A
ENST00000538511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.347±0.00 7.651±0.00 43.454±0.00
ENST00000539057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539659 N/A N/A N/A 1.854±0.00 N/A N/A N/A 2.010±0.00 N/A N/A N/A N/A N/A N/A
ENST00000540793 N/A N/A N/A N/A N/A N/A 2.178±0.00 N/A N/A 1.779±0.00 2.814±0.00 N/A 1.610±0.00 10.085±0.12
ENST00000541056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543189 N/A N/A N/A N/A 2.780±0.00 2.605±0.00 1.782±0.00 N/A 2.243±0.00 3.384±0.00 N/A 2.866±0.00 N/A N/A
ENST00000544627 N/A N/A 1.545±0.00 N/A N/A N/A 1.377±0.00 1.789±0.00 N/A N/A N/A 2.833±0.00 N/A N/A
ENST00000545723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200475 ENST00000363605 N/A 0.047±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227760 ENST00000544546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00
ENSG00000255749 ENST00000541815 0.100±0.00 N/A N/A 0.056±0.00 0.057±0.00 N/A N/A N/A N/A N/A N/A 0.094±0.00 N/A 0.300±0.16
ENSG00000256084 ENST00000538329 N/A 0.367±0.00 N/A 0.084±0.00 0.075±0.00 0.094±0.00 N/A 0.123±0.00 N/A 0.192±0.00 N/A 0.167±0.11 0.100±0.03 0.155±0.00
ENSG00000273079 ENST00000609686 0.021±0.00 0.213±0.00 0.032±0.00 5.611±0.00 0.261±0.23 0.019±0.01 0.007±0.00 0.027±0.00 N/A 0.020±0.01 0.025±0.02 0.198±0.19 0.003±0.00 0.072±0.03
ENSG00000277935 ENST00000621825 N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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