C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: basigin (Ok blood group)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172270 BSG 9606 + 19:571309-583493 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333511 BSG-001 572570-583493 protein_coding
  ENST00000346916 BSG-002 571310-583493 protein_coding
  ENST00000353555 BSG-003 572578-583493 protein_coding
  ENST00000545507 BSG-006 571309-583493 protein_coding
  ENST00000571735 BSG-005 578848-583492 retained_intron
  ENST00000572899 BSG-012 572596-580695 retained_intron
  ENST00000573216 BSG-007 572572-581376 protein_coding
  ENST00000573784 BSG-008 575047-581402 protein_coding
  ENST00000574970 BSG-009 575052-579629 processed_transcript
  ENST00000576925 BSG-011 572572-579979 retained_intron
  ENST00000576984 BSG-010 575213-580775 protein_coding
  ENST00000590218 BSG-013 572596-578212 retained_intron
  ENST00000612317 BSG-016 572607-582596 protein_coding
  ENST00000613627 BSG-014 572610-581543 protein_coding
  ENST00000614867 BSG-015 572623-583493 protein_coding
  ENST00000618006 BSG-004 572619-583487 protein_coding
  ENST00000618112 BSG-017 582493-583430 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000346916ENST00000353555ENST00000573216ENST00000612317ENST00000618006ENST00000618112
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000346916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.223±0.00 N/A N/A
ENST00000353555 399.388±0.00 184.592±0.00 19.832±0.00 152.003±114.78 136.011±116.49 156.993±124.28 128.812±89.29 89.457±82.38 38.833±23.75 25.875±17.26 53.470±20.61 153.223±136.24 539.751±257.71 299.878±184.04
ENST00000573216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 137.358±0.00 458.602±0.00 400.928±0.00
ENST00000612317 N/A N/A 15.393±0.00 17.765±0.00 20.522±0.00 39.972±0.00 21.287±0.00 65.122±58.84 11.417±0.00 19.949±0.00 N/A 10.682±0.00 N/A 195.460±0.00
ENST00000618006 N/A N/A N/A N/A N/A N/A N/A N/A 16.519±0.00 43.445±0.00 N/A N/A N/A 82.677±0.00
ENST00000618112 N/A N/A N/A N/A N/A N/A N/A 93.681±0.00 N/A N/A N/A 113.033±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0001 VISTA 19:477571-1083531
CIL_00008J CIL_00008J_0001 CGP 19:544034-583493
CIL_00008I CIL_00008I_0001 CGP 19:571309-617159

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0002080 IEA acrosomal membrane
GO:0005515 IPI:IEA protein binding
GO:0005537 IEA mannose binding
GO:0005739 IDA mitochondrion
GO:0005886 IDA plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0005925 IDA focal adhesion
GO:0006090 TAS pyruvate metabolic process
GO:0007166 TAS cell surface receptor signaling pathway
GO:0007566 IEA embryo implantation
GO:0007596 TAS blood coagulation
GO:0016020 IDA membrane
GO:0022617 TAS extracellular matrix disassembly
GO:0030198 TAS extracellular matrix organization
GO:0042383 IEA sarcolemma
GO:0042475 IEA odontogenesis of dentin-containing tooth
GO:0043434 IEA response to peptide hormone
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045121 IEA membrane raft
GO:0046689 IEA response to mercury ion
GO:0046697 IEA decidualization
GO:0050900 TAS leukocyte migration
GO:0051591 IEA response to cAMP
GO:0070062 IDA extracellular vesicular exosome
GO:0072661 ISS protein targeting to plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000023175 Bsg basigin protein_coding Mus_musculus

Loading