C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basigin (Ok blood group)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612317 BSG-016 ENSG00000172270 9606 + 19:572607-582596 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000612317
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000612317 15.393±0.00 17.765±0.00 20.522±0.00 39.972±0.00 21.287±0.00 65.122±58.84 11.417±0.00 19.949±0.00 10.682±0.00 195.460±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0001 VISTA 19:477571-1083531
CIL_00008J CIL_00008J_0001 CGP 19:544034-583493
CIL_00008I CIL_00008I_0001 CGP 19:571309-617159

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005515 IPI:IEA protein binding
GO:0005537 IEA mannose binding
GO:0005739 IDA mitochondrion
GO:0005886 IDA plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0005925 IDA focal adhesion
GO:0006090 TAS pyruvate metabolic process
GO:0007166 TAS cell surface receptor signaling pathway
GO:0007596 TAS blood coagulation
GO:0016020 IDA membrane
GO:0022617 TAS extracellular matrix disassembly
GO:0030198 TAS extracellular matrix organization
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0050900 TAS leukocyte migration
GO:0070062 IDA extracellular vesicular exosome
GO:0072661 ISS protein targeting to plasma membrane

Homologs

No Homologs available.

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