C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00008I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172270-ENSG00000099822 CGP 9606 19:571309-617159
GeneTranscriptPositionBiotype
ENSG00000099822 (HCN2)
hyperpolarization activated cyclic nucleotide-gated potassium channel 2 		ENST00000251287 (HCN2-001) 589893-617159 protein_coding
ENSG00000267036 (AC005559.3)
 ENST00000589661 (AC005559.3-001) 590430-591300 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00008I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023175-ENSMUSG00000020331 CGP 10090 10:79704491-79736108
GeneTranscriptPositionBiotype
ENSMUSG00000020331 (Hcn2)
hyperpolarization-activated, cyclic nucleotide-gated K+ 2 		ENSMUST00000020581 (Hcn2-201) 79716634-79736108 protein_coding
ENSMUST00000099513 (Hcn2-001) 79716634-79736108 protein_coding
ENSMUSG00000023175 (Bsg)
basigin 		ENSMUST00000067036 (Bsg-001) 79704500-79711895 protein_coding
ENSMUST00000105381 (Bsg-006) 79709598-79711969 protein_coding
ENSMUST00000178383 (Bsg-005) 79704570-79711823 protein_coding
ENSMUST00000179201 (Bsg-004) 79704508-79710728 processed_transcript
ENSMUST00000179781 (Bsg-002) 79704491-79711969 protein_coding
ENSMUST00000180235 (Bsg-003) 79710105-79711710 retained_intron

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008I_0001ENSG00000099822ENST00000251287ENSG00000267036ENST00000589661CIL_00008I_0002ENSMUSG00000020331ENSMUST00000020581ENSMUST00000099513ENSMUSG00000023175ENSMUST00000067036ENSMUST00000105381ENSMUST00000178383ENSMUST00000179201ENSMUST00000179781ENSMUST00000180235
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008I_0001ENSG00000099822ENST00000251287ENSG00000267036ENST00000589661CIL_00008I_0002ENSMUSG00000020331ENSMUST00000020581ENSMUST00000099513ENSMUSG00000023175ENSMUST00000067036ENSMUST00000105381ENSMUST00000178383ENSMUST00000179201ENSMUST00000179781
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099822 ENST00000251287 0.155±0.00 0.356±0.00 0.090±0.00 24.527±21.03 0.092±0.00 0.468±0.00 2.588±2.51 1.222±0.00 0.073±0.00 0.129±0.00 0.023±0.00 0.091±0.04 0.245±0.06 4.506±2.00
ENSG00000267036 ENST00000589661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.342±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020331 ENSMUST00000020581 N/A 1.918±1.42 N/A 68.643±0.00 0.667±0.13 1.319±0.47 3.416±0.75 0.167±0.01 0.109±0.07 0.407±0.00 0.192±0.00 1.474±0.94 5.006±4.09 0.205±0.16
ENSMUST00000099513 0.654±0.18 4.117±1.43 0.493±0.10 8.423±6.02 0.361±0.12 6.547±0.75 6.678±2.63 0.531±0.16 0.136±0.06 0.900±0.26 0.504±0.16 2.541±0.93 4.204±2.73 0.236±0.06
ENSMUSG00000023175 ENSMUST00000067036 N/A 27.115±6.74 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000105381 N/A N/A N/A N/A 27.648±0.00 N/A N/A N/A N/A N/A N/A 246.717±25.67 N/A N/A
ENSMUST00000178383 N/A N/A N/A 293.634±0.00 N/A N/A N/A N/A N/A N/A N/A 299.593±0.00 993.451±336.76 173.777±0.00
ENSMUST00000179201 184.027±40.89 209.272±82.87 N/A 101.498±3.39 174.059±34.42 287.568±64.06 263.923±42.89 221.277±0.00 227.405±0.00 204.644±31.38 N/A 279.363±143.16 566.111±0.00 57.835±0.00
ENSMUST00000179781 247.932±33.03 140.498±29.63 274.396±17.09 165.726±81.03 188.648±46.95 544.507±46.18 545.545±72.00 390.905±32.36 419.187±106.68 289.047±15.91 297.828±13.23 309.638±121.86 521.326±287.08 353.952±162.32
ENSMUST00000180235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading