C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00008I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172270-ENSG00000099822 CGP 9606 19:571309-617159
GeneTranscriptPositionBiotype
ENSG00000099822 (HCN2)
hyperpolarization activated cyclic nucleotide-gated potassium channel 2 		ENST00000251287 (HCN2-001) 589893-617159 protein_coding
ENSG00000267036 (AC005559.3)
 ENST00000589661 (AC005559.3-001) 590430-591300 processed_pseudogene
CIL_00008I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023175-ENSMUSG00000020331 CGP 10090 10:79704491-79736108
GeneTranscriptPositionBiotype
ENSMUSG00000020331 (Hcn2)
hyperpolarization-activated, cyclic nucleotide-gated K+ 2 		ENSMUST00000020581 (Hcn2-201) 79716634-79736108 protein_coding
ENSMUST00000099513 (Hcn2-001) 79716634-79736108 protein_coding
ENSMUSG00000023175 (Bsg)
basigin 		ENSMUST00000067036 (Bsg-001) 79704500-79711895 protein_coding
ENSMUST00000105381 (Bsg-006) 79709598-79711969 protein_coding
ENSMUST00000178383 (Bsg-005) 79704570-79711823 protein_coding
ENSMUST00000179201 (Bsg-004) 79704508-79710728 processed_transcript
ENSMUST00000179781 (Bsg-002) 79704491-79711969 protein_coding
ENSMUST00000180235 (Bsg-003) 79710105-79711710 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008I_0001ENSG00000099822ENST00000251287ENSG00000267036ENST00000589661CIL_00008I_0002ENSMUSG00000020331ENSMUST00000020581ENSMUST00000099513ENSMUSG00000023175ENSMUST00000067036ENSMUST00000105381ENSMUST00000178383ENSMUST00000179201ENSMUST00000179781ENSMUST00000180235
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008I_0001ENSG00000099822ENST00000251287ENSG00000267036ENST00000589661CIL_00008I_0002ENSMUSG00000020331ENSMUST00000020581ENSMUST00000099513ENSMUSG00000023175ENSMUST00000067036ENSMUST00000105381ENSMUST00000178383ENSMUST00000179201ENSMUST00000179781
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099822 ENST00000251287 0.155±0.00 0.356±0.00 0.090±0.00 24.527±21.03 0.092±0.00 0.468±0.00 2.588±2.51 1.222±0.00 0.073±0.00 0.129±0.00 0.023±0.00 0.091±0.04 0.245±0.06 4.506±2.00
ENSG00000267036 ENST00000589661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.342±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020331 ENSMUST00000020581 N/A 1.918±1.42 N/A 68.643±0.00 0.667±0.13 1.319±0.47 3.416±0.75 0.167±0.01 0.109±0.07 0.407±0.00 0.192±0.00 1.474±0.94 5.006±4.09 0.205±0.16
ENSMUST00000099513 0.654±0.18 4.117±1.43 0.493±0.10 8.423±6.02 0.361±0.12 6.547±0.75 6.678±2.63 0.531±0.16 0.136±0.06 0.900±0.26 0.504±0.16 2.541±0.93 4.204±2.73 0.236±0.06
ENSMUSG00000023175 ENSMUST00000067036 N/A 27.115±6.74 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000105381 N/A N/A N/A N/A 27.648±0.00 N/A N/A N/A N/A N/A N/A 246.717±25.67 N/A N/A
ENSMUST00000178383 N/A N/A N/A 293.634±0.00 N/A N/A N/A N/A N/A N/A N/A 299.593±0.00 993.451±336.76 173.777±0.00
ENSMUST00000179201 184.027±40.89 209.272±82.87 N/A 101.498±3.39 174.059±34.42 287.568±64.06 263.923±42.89 221.277±0.00 227.405±0.00 204.644±31.38 N/A 279.363±143.16 566.111±0.00 57.835±0.00
ENSMUST00000179781 247.932±33.03 140.498±29.63 274.396±17.09 165.726±81.03 188.648±46.95 544.507±46.18 545.545±72.00 390.905±32.36 419.187±106.68 289.047±15.91 297.828±13.23 309.638±121.86 521.326±287.08 353.952±162.32
ENSMUST00000180235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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