Source ID |
Type |
Tax ID |
Position |
hs1875 |
VISTA |
9606 |
12:53732854-54334005 |
Gene | Transcript | Position | Biotype |
ENSG00000037965 (HOXC8)
homeobox C8
|
ENST00000040584 (HOXC8-001)
|
54009106-54012362 |
protein_coding |
ENSG00000094916 (CBX5)
chromobox homolog 5
|
ENST00000209875 (CBX5-002)
|
54230940-54280102 |
protein_coding |
ENST00000439541 (CBX5-004)
|
54240625-54259592 |
protein_coding |
ENST00000547872 (CBX5-006)
|
54241747-54252525 |
retained_intron |
ENST00000550411 (CBX5-003)
|
54241755-54259545 |
protein_coding |
ENST00000552562 (CBX5-005)
|
54252091-54258427 |
protein_coding |
ENST00000618078 (CBX5-007)
|
54271841-54280133 |
processed_transcript |
ENSG00000111481 (COPZ1)
coatomer protein complex, subunit zeta 1
|
ENST00000262061 (COPZ1-001)
|
54325127-54351849 |
protein_coding |
ENST00000455864 (COPZ1-004)
|
54325139-54350913 |
protein_coding |
ENST00000548076 (COPZ1-007)
|
54301220-54343279 |
processed_transcript |
ENST00000548281 (COPZ1-013)
|
54325202-54350578 |
processed_transcript |
ENST00000548753 (COPZ1-014)
|
54325584-54350686 |
protein_coding |
ENST00000549043 (COPZ1-002)
|
54325129-54351102 |
protein_coding |
ENST00000549116 (COPZ1-012)
|
54325144-54350879 |
protein_coding |
ENST00000550027 (COPZ1-016)
|
54325139-54348132 |
retained_intron |
ENST00000550171 (COPZ1-003)
|
54325139-54351082 |
nonsense_mediated_decay |
ENST00000550713 (COPZ1-015)
|
54340372-54347840 |
protein_coding |
ENST00000551412 (COPZ1-011)
|
54325139-54347972 |
retained_intron |
ENST00000551779 (COPZ1-005)
|
54325151-54350621 |
protein_coding |
ENST00000551962 (COPZ1-009)
|
54325131-54350590 |
nonsense_mediated_decay |
ENST00000552218 (COPZ1-010)
|
54325131-54350690 |
protein_coding |
ENST00000552362 (COPZ1-017)
|
54325139-54350590 |
protein_coding |
ENST00000552848 (COPZ1-006)
|
54301202-54345475 |
protein_coding |
ENST00000553009 (COPZ1-008)
|
54325109-54342630 |
retained_intron |
ENST00000553231 (COPZ1-018)
|
54325139-54350354 |
protein_coding |
ENSG00000123364 (HOXC13)
homeobox C13
|
ENST00000243056 (HOXC13-001)
|
53938765-53946544 |
protein_coding |
ENSG00000123388 (HOXC11)
homeobox C11
|
ENST00000243082 (HOXC11-002)
|
53973128-53976419 |
protein_coding |
ENST00000546378 (HOXC11-001)
|
53973126-53977643 |
protein_coding |
ENSG00000123405 (NFE2)
nuclear factor, erythroid 2
|
ENST00000312156 (NFE2-003)
|
54292111-54295760 |
protein_coding |
ENST00000435572 (NFE2-001)
|
54292111-54301121 |
protein_coding |
ENST00000540264 (NFE2-004)
|
54292173-54295758 |
protein_coding |
ENST00000553070 (NFE2-002)
|
54292374-54301015 |
protein_coding |
ENST00000553198 (NFE2-005)
|
54292465-54297884 |
protein_coding |
ENSG00000123407 (HOXC12)
homeobox C12
|
ENST00000243103 (HOXC12-001)
|
53954834-53958956 |
protein_coding |
ENSG00000123415 (SMUG1)
single-strand-selective monofunctional uracil-DNA glycosylase 1
|
ENST00000243112 (SMUG1-008)
|
54181471-54188976 |
protein_coding |
ENST00000337581 (SMUG1-005)
|
54181468-54188974 |
protein_coding |
ENST00000401977 (SMUG1-020)
|
54181954-54188622 |
protein_coding |
ENST00000503231 (SMUG1-015)
|
54187214-54188957 |
processed_transcript |
ENST00000503306 (SMUG1-018)
|
54183695-54188974 |
protein_coding |
ENST00000503447 (SMUG1-009)
|
54183417-54188992 |
retained_intron |
ENST00000504338 (SMUG1-017)
|
54182392-54188871 |
protein_coding |
ENST00000504797 (SMUG1-016)
|
54183654-54188946 |
protein_coding |
ENST00000505128 (SMUG1-007)
|
54181457-54188972 |
protein_coding |
ENST00000505597 (SMUG1-014)
|
54186983-54188957 |
processed_transcript |
ENST00000505662 (SMUG1-006)
|
54181485-54187906 |
processed_transcript |
ENST00000506169 (SMUG1-011)
|
54183670-54188985 |
protein_coding |
ENST00000506595 (SMUG1-021)
|
54181453-54188607 |
protein_coding |
ENST00000507904 (SMUG1-010)
|
54182585-54188990 |
protein_coding |
ENST00000508394 (SMUG1-001)
|
54181275-54188994 |
protein_coding |
ENST00000509078 (SMUG1-019)
|
54182558-54184296 |
retained_intron |
ENST00000509864 (SMUG1-022)
|
54164745-54183933 |
nonsense_mediated_decay |
ENST00000511522 (SMUG1-012)
|
54182098-54188985 |
retained_intron |
ENST00000511854 (SMUG1-023)
|
54181453-54182759 |
retained_intron |
ENST00000513838 (SMUG1-003)
|
54180358-54188957 |
protein_coding |
ENST00000514196 (SMUG1-013)
|
54182072-54188980 |
protein_coding |
ENST00000514685 (SMUG1-004)
|
54181453-54188940 |
protein_coding |
ENSG00000135486 (HNRNPA1)
heterogeneous nuclear ribonucleoprotein A1
|
ENST00000330752 (HNRNPA1-023)
|
54280775-54284881 |
protein_coding |
ENST00000340913 (HNRNPA1-002)
|
54280755-54285214 |
protein_coding |
ENST00000546500 (HNRNPA1-001)
|
54280193-54287087 |
protein_coding |
ENST00000547276 (HNRNPA1-012)
|
54280780-54285251 |
protein_coding |
ENST00000547566 (HNRNPA1-006)
|
54280748-54287088 |
nonsense_mediated_decay |
ENST00000547708 (HNRNPA1-015)
|
54280748-54283878 |
protein_coding |
ENST00000547870 (HNRNPA1-016)
|
54280749-54282472 |
retained_intron |
ENST00000548688 (HNRNPA1-013)
|
54281006-54282626 |
protein_coding |
ENST00000550482 (HNRNPA1-018)
|
54282198-54284569 |
protein_coding |
ENST00000550994 (HNRNPA1-014)
|
54281186-54282284 |
protein_coding |
ENST00000551665 (HNRNPA1-021)
|
54285907-54287051 |
retained_intron |
ENST00000551679 (HNRNPA1-020)
|
54283723-54284371 |
retained_intron |
ENST00000551702 (HNRNPA1-019)
|
54280763-54282486 |
protein_coding |
ENST00000551803 (HNRNPA1-022)
|
54285947-54287087 |
processed_transcript |
ENSG00000180806 (HOXC9)
homeobox C9
|
ENST00000303450 (HOXC9-001)
|
54000119-54003337 |
protein_coding |
ENST00000504557 (HOXC9-003)
|
53994895-54002888 |
processed_transcript |
ENST00000508190 (HOXC9-002)
|
53995509-54003298 |
protein_coding |
ENSG00000180818 (HOXC10)
homeobox C10
|
ENST00000303460 (HOXC10-001)
|
53985186-53990279 |
protein_coding |
ENST00000511575 (HOXC10-003)
|
53986132-53989993 |
processed_transcript |
ENST00000513413 (HOXC10-005)
|
53986430-53989710 |
processed_transcript |
ENST00000514415 (HOXC10-004)
|
53986338-53989675 |
processed_transcript |
ENST00000515593 (HOXC10-002)
|
53985065-53985977 |
protein_coding |
ENSG00000197757 (HOXC6)
homeobox C6
|
ENST00000243108 (HOXC6-001)
|
54028358-54030823 |
protein_coding |
ENST00000394331 (HOXC6-002)
|
54015897-54030733 |
protein_coding |
ENST00000504315 (HOXC6-003)
|
53990624-54028922 |
protein_coding |
ENST00000509328 (HOXC6-004)
|
53994944-54029689 |
protein_coding |
ENSG00000198353 (HOXC4)
homeobox C4
|
ENST00000303406 (HOXC4-001)
|
54016931-54055327 |
protein_coding |
ENST00000430889 (HOXC4-003)
|
54053877-54056030 |
protein_coding |
ENST00000507650 (HOXC4-002)
|
54037854-54053424 |
processed_transcript |
ENSG00000228630 (HOTAIR)
HOX transcript antisense RNA
|
ENST00000424518 (HOTAIR-001)
|
53962308-53974956 |
antisense |
ENST00000425595 (HOTAIR-005)
|
53963802-53966630 |
antisense |
ENST00000439545 (HOTAIR-003)
|
53964085-53968914 |
antisense |
ENST00000453875 (HOTAIR-004)
|
53963901-53967355 |
antisense |
ENST00000455246 (HOTAIR-002)
|
53963749-53974947 |
antisense |
ENSG00000241785 (RN7SL390P)
RNA, 7SL, cytoplasmic 390, pseudogene
|
ENST00000470634 (RN7SL390P-201)
|
54255627-54255910 |
misc_RNA |
ENSG00000248265 (FLJ12825)
uncharacterized LOC440101
|
ENST00000515617 (FLJ12825-001)
|
54058254-54122234 |
lincRNA |
ENSG00000248576 (RP11-834C11.8)
|
ENST00000504210 (RP11-834C11.8-001)
|
54163139-54168595 |
antisense |
ENSG00000249388 (RP11-834C11.6)
|
ENST00000504891 (RP11-834C11.6-001)
|
54082118-54102693 |
lincRNA |
ENSG00000249641 (HOXC13-AS)
HOXC13 antisense RNA
|
ENST00000512916 (HOXC13-AS-001)
|
53935328-53939643 |
antisense |
ENSG00000250432 (RP11-834C11.5)
|
ENST00000504278 (RP11-834C11.5-004)
|
54121276-54125894 |
lincRNA |
ENST00000505661 (RP11-834C11.5-003)
|
54121279-54125992 |
lincRNA |
ENST00000508763 (RP11-834C11.5-001)
|
54114013-54125891 |
lincRNA |
ENST00000513381 (RP11-834C11.5-002)
|
54085132-54125830 |
lincRNA |
ENSG00000250451 (HOXC-AS1)
HOXC cluster antisense RNA 1
|
ENST00000505700 (HOXC-AS1-001)
|
53999022-54000010 |
antisense |
ENST00000512427 (HOXC-AS1-002)
|
53999022-53999620 |
antisense |
ENSG00000250654 (RP11-834C11.7)
|
ENST00000505259 (RP11-834C11.7-002)
|
54078923-54081823 |
processed_transcript |
ENST00000510754 (RP11-834C11.7-001)
|
54079267-54080288 |
transcribed_unprocessed_pseudogene |
ENST00000514503 (RP11-834C11.7-003)
|
54076838-54081903 |
processed_transcript |
ENST00000607809 (RP11-834C11.7-004)
|
54078923-54080433 |
processed_transcript |
ENSG00000250742 (RP11-834C11.4)
|
ENST00000508564 (RP11-834C11.4-001)
|
54126098-54132843 |
lincRNA |
ENSG00000257534 (RP11-834C11.10)
|
ENST00000551732 (RP11-834C11.10-001)
|
54162065-54164452 |
lincRNA |
ENSG00000257596 (RP11-968A15.2)
|
ENST00000547177 (RP11-968A15.2-001)
|
54262615-54279063 |
antisense |
ENSG00000258344 (RP11-968A15.8)
|
ENST00000553061 (RP11-968A15.8-001)
|
54276631-54345083 |
sense_overlapping |
ENSG00000260030 (RP11-686F15.2)
|
ENST00000566418 (RP11-686F15.2-001)
|
53754358-53762104 |
lincRNA |
ENSG00000260470 (RP11-834C11.11)
|
ENST00000564380 (RP11-834C11.11-001)
|
54145069-54147225 |
lincRNA |
ENSG00000260492 (CISTR)
chondrogenesis-associated transcript
|
ENST00000570015 (CISTR-001)
|
53750447-53751835 |
lincRNA |
ENSG00000260597 (AC012531.25)
|
ENST00000562848 (AC012531.25-001)
|
54019910-54022589 |
lincRNA |
ENSG00000273046 (HOXC5)
homeobox C5
|
ENST00000512206 (HOXC5-001)
|
54017110-54035361 |
processed_transcript |
ENSG00000274817 (HOTAIR_4)
HOTAIR intron conserved region 4
|
ENST00000616509 (HOTAIR_4.1-201)
|
53968002-53968178 |
misc_RNA |
ENSG00000277129 (HOTAIR_5)
HOTAIR intron conserved region 5
|
ENST00000611375 (HOTAIR_5.1-201)
|
53968351-53968501 |
misc_RNA |