C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 2',3'-cyclic nucleotide 3' phosphodiesterase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173786 CNP 9606 + 17:41966741-41977731 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000393888 CNP-002 41966815-41975176 protein_coding
  ENST00000393892 CNP-001 41966741-41977731 protein_coding
  ENST00000441615 CNP-004 41966882-41968557 protein_coding
  ENST00000472031 CNP-003 41966763-41974228 protein_coding
  ENST00000486438 CNP-005 41971609-41973962 retained_intron
  ENST00000585452 CNP-011 41967783-41968585 protein_coding
  ENST00000587679 CNP-010 41966798-41968669 protein_coding
  ENST00000589772 CNP-007 41967333-41968486 protein_coding
  ENST00000591945 CNP-008 41966795-41968175 processed_transcript
  ENST00000592105 CNP-012 41971288-41973817 processed_transcript
  ENST00000592446 CNP-009 41966798-41968503 processed_transcript
  ENST00000592861 CNP-013 41970281-41971797 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000393888ENST00000393892
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000393888 52.582±0.00 49.731±0.00 5.301±0.00 261.577±236.58 35.402±0.00 20.521±14.71 13.933±0.00 30.604±27.06 9.765±6.58 19.146±0.00 16.322±0.00 46.907±26.24 36.921±4.00 39.173±0.00
ENST00000393892 N/A N/A 1.377±0.00 63.240±50.22 N/A N/A N/A N/A 1.533±0.00 1.359±0.00 2.217±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KT CIL_0000KT_0002 CGP 17:41930635-41977731
CIL_0006EX CIL_0006EX_0001 CGP 17:41966741-42021376

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0003723 IEA RNA binding
GO:0004113 IEA 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity
GO:0005524 IEA ATP binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005741 IEA mitochondrial outer membrane
GO:0005743 IEA mitochondrial inner membrane
GO:0005874 IDA microtubule
GO:0005886 IEA plasma membrane
GO:0005902 IEA microvillus
GO:0007268 TAS synaptic transmission
GO:0007409 IEA axonogenesis
GO:0007568 IEA aging
GO:0008344 IEA adult locomotory behavior
GO:0009214 IEA cyclic nucleotide catabolic process
GO:0009636 IEA response to toxic substance
GO:0016020 IDA:IEA membrane
GO:0016301 IEA kinase activity
GO:0021762 IEP substantia nigra development
GO:0030551 IEA cyclic nucleotide binding
GO:0030900 IEA forebrain development
GO:0031143 IEA pseudopodium
GO:0032496 IEA response to lipopolysaccharide
GO:0035748 IEA myelin sheath abaxonal region
GO:0035749 IEA myelin sheath adaxonal region
GO:0042995 IEA cell projection
GO:0043209 IEA myelin sheath
GO:0046902 IEA regulation of mitochondrial membrane permeability
GO:0048471 IEA perinuclear region of cytoplasm
GO:0048709 IEA oligodendrocyte differentiation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070822 cnp 2',3'-cyclic nucleotide 3' phosphodiesterase protein_coding Danio_rerio
ENSDARG00000091351 cnp 2',3'-cyclic nucleotide 3' phosphodiesterase protein_coding Danio_rerio
ENSMUSG00000006782 Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase protein_coding Mus_musculus

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