C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 2',3'-cyclic nucleotide 3' phosphodiesterase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393888 CNP-002 ENSG00000173786 9606 + 17:41966815-41975176 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000393888
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000393888 52.582±0.00 49.731±0.00 5.301±0.00 261.577±236.58 35.402±0.00 20.521±14.71 13.933±0.00 30.604±27.06 9.765±6.58 19.146±0.00 16.322±0.00 46.907±26.24 36.921±4.00 39.173±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KT CIL_0000KT_0002 CGP 17:41930635-41977731
CIL_0006EX CIL_0006EX_0001 CGP 17:41966741-42021376

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0004113 IEA 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity
GO:0005524 IEA ATP binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005874 IDA microtubule
GO:0007268 TAS synaptic transmission
GO:0009214 IEA cyclic nucleotide catabolic process
GO:0016020 IDA:IEA membrane
GO:0016301 IEA kinase activity
GO:0021762 IEP substantia nigra development
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103120 Cnp-001 protein_coding Mus_musculus 0 1369
ENSMUST00000150414 Cnp-002 processed_transcript Mus_musculus 0 1341
ENSMUST00000147403 Cnp-003 processed_transcript Mus_musculus 0 918

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