C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc fingers and homeoboxes 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174306 ZHX3 9606 - 20:41178448-41317672 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309060 ZHX3-010 41178448-41300078 protein_coding
  ENST00000373261 ZHX3-009 41204628-41300078 protein_coding
  ENST00000419740 ZHX3-019 41204778-41272253 protein_coding
  ENST00000421422 ZHX3-008 41178448-41204041 protein_coding
  ENST00000432768 ZHX3-011 41184916-41300126 protein_coding
  ENST00000436099 ZHX3-022 41204774-41300074 protein_coding
  ENST00000436440 ZHX3-005 41204648-41300078 protein_coding
  ENST00000441102 ZHX3-021 41204562-41317597 protein_coding
  ENST00000485686 ZHX3-016 41268981-41300117 processed_transcript
  ENST00000487057 ZHX3-003 41213758-41300090 processed_transcript
  ENST00000540170 ZHX3-201 41178451-41300081 protein_coding
  ENST00000544979 ZHX3-002 41184368-41272258 protein_coding
  ENST00000558993 ZHX3-013 41184821-41317186 protein_coding
  ENST00000559028 ZHX3-017 41268990-41300127 processed_transcript
  ENST00000559234 ZHX3-007 41182115-41317602 protein_coding
  ENST00000559296 ZHX3-015 41268990-41317672 processed_transcript
  ENST00000559436 ZHX3-004 41184820-41202396 protein_coding
  ENST00000560361 ZHX3-001 41184827-41300094 protein_coding
  ENST00000560364 ZHX3-006 41182114-41300087 protein_coding
  ENST00000560456 ZHX3-018 41268990-41272273 processed_transcript
  ENST00000560759 ZHX3-014 41268990-41272264 processed_transcript
  ENST00000561291 ZHX3-020 41238727-41272245 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000309060ENST00000421422ENST00000432768ENST00000559234
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000309060 N/A N/A N/A 2.869±1.15 N/A N/A N/A N/A 1.511±0.00 N/A N/A N/A
ENST00000421422 3.964±0.00 3.928±0.00 3.331±0.00 4.306±0.00 2.264±0.00 2.604±1.28 2.015±1.02 3.743±0.80 2.255±0.33 3.373±0.00 4.011±0.00 6.687±0.00
ENST00000432768 N/A N/A 3.173±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559234 N/A N/A N/A N/A N/A N/A N/A N/A 2.106±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AV CIL_0009AV_0001 VISTA 20:40645674-41248255
CIL_0004EC CIL_0004EC_0001 CGP 20:41028818-41196787
CIL_0002I4 CIL_0002I4_0001 CGP 20:41136960-41317672
CIL_0004E6 CIL_0004E6_0001 CGP 20:41178448-41360582

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003714 IEA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0030154 IEA cell differentiation
GO:0042803 IDA protein homodimerization activity
GO:0045669 IMP positive regulation of osteoblast differentiation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0046982 IDA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019774 zhx3 zinc fingers and homeoboxes 3 protein_coding Danio_rerio
ENSMUSG00000035877 Zhx3 zinc fingers and homeoboxes 3 protein_coding Mus_musculus

Loading