C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc fingers and homeoboxes 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421422 ZHX3-008 ENSG00000174306 9606 - 20:41178448-41204041 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000421422
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000421422 3.964±0.00 3.928±0.00 3.331±0.00 4.306±0.00 2.264±0.00 2.604±1.28 2.015±1.02 3.743±0.80 2.255±0.33 3.373±0.00 4.011±0.00 6.687±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AV CIL_0009AV_0001 VISTA 20:40645674-41248255
CIL_0004EC CIL_0004EC_0001 CGP 20:41028818-41196787
CIL_0002I4 CIL_0002I4_0001 CGP 20:41136960-41317672
CIL_0004E6 CIL_0004E6_0001 CGP 20:41178448-41360582

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109460 Zhx3-201 protein_coding Mus_musculus 0 2063
ENSMUST00000103112 Zhx3-001 protein_coding Mus_musculus 0 2063
ENSMUST00000103111 Zhx3-003 protein_coding Mus_musculus 0 2063
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00001 58

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