C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: von Willebrand factor C domain containing protein 2-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174453 VWC2L 9606 + 2:214411065-214578959 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312504 VWC2L-001 214411065-214578959 protein_coding
  ENST00000427124 VWC2L-003 214411065-214578959 protein_coding
  ENST00000477752 VWC2L-002 214411077-214415203 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverLungOvaryPlacentaTestisENST00000312504ENST00000427124ENST00000477752
Transcript ID Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000312504 N/A 0.145±0.00 N/A 0.009±0.00 N/A N/A N/A N/A N/A
ENST00000427124 N/A 0.839±0.24 0.010±0.01 N/A N/A N/A N/A 0.007±0.00 0.035±0.00
ENST00000477752 0.076±0.00 0.555±0.00 0.082±0.00 N/A 0.214±0.00 0.106±0.00 0.005±0.00 N/A 0.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MG CIL_0005MG_0001 CGP 2:213284379-214578959
CIL_0000AI CIL_0000AI_0002 CGP 2:214411065-214809711

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0030054 IEA cell junction
GO:0030514 IEA negative regulation of BMP signaling pathway
GO:0032281 IEA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0045202 IEA synapse
GO:0045666 IEA positive regulation of neuron differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069134 vwc2l von Willebrand factor C domain-containing protein 2-like protein_coding Danio_rerio
ENSMUSG00000045648 Vwc2l von Willebrand factor C domain-containing protein 2-like protein_coding Mus_musculus

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