C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: von Willebrand factor C domain containing protein 2-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000312504 VWC2L-001 ENSG00000174453 9606 + 2:214411065-214578959 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyENST00000312504
Transcript ID Brain Kidney
ENST00000312504 0.145±0.00 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MG CIL_0005MG_0001 CGP 2:213284379-214578959
CIL_0000AI CIL_0000AI_0002 CGP 2:214411065-214809711

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0030054 IEA cell junction
GO:0030514 IEA negative regulation of BMP signaling pathway
GO:0032281 IEA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0045202 IEA synapse
GO:0045666 IEA positive regulation of neuron differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053922 Vwc2l-001 protein_coding Mus_musculus 0 2778
ENSMUST00000159205 Vwc2l-003 retained_intron Mus_musculus 0 1585
ENSMUST00000161937 Vwc2l-002 protein_coding Mus_musculus 0 1393
ENSMUST00000162182 Vwc2l-004 protein_coding Mus_musculus 0 881

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