C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: poly(A) binding protein, cytoplasmic 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174740 PABPC5 9606 + X:91434595-91438584 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312600 PABPC5-001 91434824-91438584 protein_coding
  ENST00000373105 PABPC5-002 91434595-91437000 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312600ENST00000373105
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312600 0.262±0.00 0.232±0.00 N/A 0.354±0.03 0.251±0.01 0.334±0.16 0.061±0.04 0.130±0.00 0.474±0.44 0.421±0.16 0.015±0.00 0.261±0.18 0.057±0.02 0.333±0.09
ENST00000373105 0.622±0.00 N/A 0.309±0.00 0.379±0.02 0.558±0.00 0.200±0.00 0.169±0.02 0.290±0.09 0.375±0.00 0.170±0.00 0.163±0.00 1.375±1.33 0.175±0.07 0.547±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007B7 CIL_0007B7_0001 CGP X:89921882-91438584
CIL_0007B8 CIL_0007B8_0001 CGP X:91434595-92623230

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005739 IEA mitochondrion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059259 pabpc4 poly(A) binding protein, cytoplasmic 4 (inducible form) protein_coding Danio_rerio
ENSMUSG00000034732 Pabpc5 poly(A) binding protein, cytoplasmic 5 protein_coding Mus_musculus

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