C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) binding protein, cytoplasmic 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000312600 PABPC5-001 ENSG00000174740 9606 + X:91434824-91438584 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312600
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312600 0.262±0.00 0.232±0.00 0.354±0.03 0.251±0.01 0.334±0.16 0.061±0.04 0.130±0.00 0.474±0.44 0.421±0.16 0.015±0.00 0.261±0.18 0.057±0.02 0.333±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007B7 CIL_0007B7_0001 CGP X:89921882-91438584
CIL_0007B8 CIL_0007B8_0001 CGP X:91434595-92623230

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005739 IEA mitochondrion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113366 Pabpc5-002 protein_coding Mus_musculus 0 1629
ENSMUST00000040961 Pabpc5-001 protein_coding Mus_musculus 0 1607

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