C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 3 open reading frame 33
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174928 C3orf33 9606 - 3:155762617-155806351 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000340171 C3orf33-001 155762617-155806351 protein_coding
  ENST00000465810 C3orf33-004 155763528-155806259 nonsense_mediated_decay
  ENST00000482061 C3orf33-002 155762617-155806266 nonsense_mediated_decay
  ENST00000486435 C3orf33-003 155763787-155806251 nonsense_mediated_decay
  ENST00000534941 C3orf33-201 155762618-155806272 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340171ENST00000465810ENST00000482061ENST00000486435ENST00000534941
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340171 N/A N/A N/A 0.955±0.00 N/A N/A N/A N/A 0.194±0.00 N/A N/A 0.566±0.04 N/A 2.502±1.14
ENST00000465810 N/A N/A 1.977±0.00 0.688±0.00 0.286±0.00 0.351±0.00 N/A 0.162±0.00 0.458±0.00 0.381±0.00 0.401±0.00 0.213±0.00 0.217±0.00 N/A
ENST00000482061 N/A N/A N/A N/A N/A N/A N/A N/A 0.256±0.00 N/A N/A N/A N/A N/A
ENST00000486435 N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A N/A 0.742±0.00 N/A 3.928±0.00
ENST00000534941 0.446±0.00 0.606±0.00 N/A 0.930±0.00 0.675±0.28 0.465±0.04 0.961±0.61 2.101±0.00 0.551±0.00 0.635±0.00 0.810±0.00 0.934±0.57 0.779±0.35 1.480±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SL CIL_0004SL_0002 CGP 3:155375580-155806351
CIL_0004SM CIL_0004SM_0002 CGP 3:155762617-155854429

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005615 IDA extracellular space
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016788 IEA hydrolase activity, acting on ester bonds
GO:0051090 IDA regulation of sequence-specific DNA binding transcription factor activity
GO:0070373 IDA negative regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040582 C18H3orf33 chromosome 3 open reading frame 33 protein_coding Danio_rerio
ENSMUSG00000048581 E130311K13Rik RIKEN cDNA E130311K13 gene protein_coding Mus_musculus

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