C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 3 open reading frame 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534941 C3orf33-201 ENSG00000174928 9606 - 3:155762618-155806272 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000534941
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000534941 0.446±0.00 0.606±0.00 0.930±0.00 0.675±0.28 0.465±0.04 0.961±0.61 2.101±0.00 0.551±0.00 0.635±0.00 0.810±0.00 0.934±0.57 0.779±0.35 1.480±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SL CIL_0004SL_0002 CGP 3:155375580-155806351
CIL_0004SM CIL_0004SM_0002 CGP 3:155762617-155854429

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005615 IDA extracellular space
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016788 IEA hydrolase activity, acting on ester bonds
GO:0051090 IDA regulation of sequence-specific DNA binding transcription factor activity
GO:0070373 IDA negative regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061706 E130311K13Rik-001 protein_coding Mus_musculus 0 717
ENSMUST00000162448 E130311K13Rik-002 processed_transcript Mus_musculus 0 309
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000001 69
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.0000007 60

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