C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006IX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175164-ENSG00000148296 CGP 9606 9:133250401-133336398
GeneTranscriptPositionBiotype
ENSG00000148296 (SURF6)
surfeit 6 		ENST00000372022 (SURF6-001) 133330716-133336398 protein_coding
ENST00000468290 (SURF6-002) 133331806-133332939 processed_transcript
ENSG00000175164 (ABO)
ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) 		ENST00000453660 (ABO-001) 133250401-133275201 processed_transcript
ENST00000538324 (ABO-201) 133255602-133275214 protein_coding
ENST00000611156 (ABO-202) 133255176-133275214 protein_coding
ENSG00000271875 (RP11-430N14.4)
 ENST00000606717 (RP11-430N14.4-001) 133250401-133255563 3prime_overlapping_ncrna

Homo sapiens Ensembl (GRCh38)

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CIL_0006IX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000015787-ENSMUSG00000036160 CGP 10090 2:26842503-26902879
GeneTranscriptPositionBiotype
ENSMUSG00000015787 (Abo)
ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase) 		ENSMUST00000102900 (Abo-001) 26842503-26864979 protein_coding
ENSMUST00000114045 (Abo-002) 26842503-26856798 protein_coding
ENSMUSG00000036160 (Surf6)
surfeit gene 6 		ENSMUST00000047632 (Surf6-001) 26890435-26902879 protein_coding
ENSMUST00000114043 (Surf6-007) 26890772-26902850 protein_coding
ENSMUST00000127691 (Surf6-006) 26899094-26899768 processed_transcript
ENSMUST00000129554 (Surf6-005) 26888925-26892173 processed_transcript
ENSMUST00000137904 (Surf6-004) 26888989-26899425 processed_transcript
ENSMUST00000140392 (Surf6-003) 26888628-26892611 processed_transcript
ENSMUST00000142131 (Surf6-002) 26892675-26902790 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IX_0001ENSG00000148296ENST00000372022ENST00000468290ENSG00000175164ENST00000453660ENST00000538324ENST00000611156ENSG00000271875ENST00000606717CIL_0006IX_0002ENSMUSG00000015787ENSMUST00000102900ENSMUST00000114045ENSMUSG00000036160ENSMUST00000047632ENSMUST00000114043ENSMUST00000127691ENSMUST00000129554ENSMUST00000137904ENSMUST00000140392ENSMUST00000142131
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IX_0001ENSG00000148296ENST00000372022ENST00000468290ENSG00000175164ENST00000453660ENST00000538324ENST00000611156ENSG00000271875ENST00000606717CIL_0006IX_0002ENSMUSG00000015787ENSMUST00000102900ENSMUST00000114045ENSMUSG00000036160ENSMUST00000047632ENSMUST00000140392
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148296 ENST00000372022 7.128±0.00 10.355±0.00 1.495±0.00 6.403±4.29 4.549±3.14 6.608±4.35 2.360±1.71 6.164±4.44 3.675±1.62 4.675±3.20 6.991±5.59 14.697±7.30 12.010±1.24 10.377±0.95
ENST00000468290 4.691±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175164 ENST00000453660 N/A N/A N/A 0.033±0.00 N/A 0.751±0.00 N/A N/A 0.087±0.00 0.498±0.35 N/A 5.042±0.00 0.162±0.03 N/A
ENST00000538324 N/A N/A N/A 0.253±0.00 N/A 3.408±0.00 N/A N/A N/A 1.786±0.00 N/A 1.486±0.00 N/A N/A
ENST00000611156 1.899±0.00 N/A N/A 0.176±0.00 N/A N/A 0.480±0.45 14.042±0.00 0.193±0.00 N/A 0.569±0.00 N/A N/A 1.746±0.00
ENSG00000271875 ENST00000606717 1.491±0.00 0.099±0.00 1.741±0.00 0.111±0.00 0.816±0.09 0.279±0.01 0.542±0.50 4.858±4.85 0.011±0.00 0.445±0.23 0.056±0.00 11.291±8.15 0.265±0.08 3.467±1.71
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015787 ENSMUST00000102900 N/A N/A 0.009±0.00 0.016±0.00 N/A 3.150±1.23 N/A N/A N/A 0.420±0.28 N/A 0.113±0.04 0.163±0.17 0.972±0.13
ENSMUST00000114045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 0.470±0.40
ENSMUSG00000036160 ENSMUST00000047632 4.824±1.15 4.070±0.56 6.334±0.46 7.223±0.56 4.024±1.48 4.975±0.56 1.873±0.51 3.085±0.30 5.779±2.60 4.139±0.53 2.124±0.28 5.908±2.69 8.872±2.94 2.314±0.22
ENSMUST00000114043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140392 0.950±0.00 N/A N/A 2.884±0.15 1.778±0.31 1.998±0.17 0.682±0.18 1.036±0.00 N/A N/A N/A 2.637±1.05 N/A 0.672±0.05
ENSMUST00000142131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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