C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006IU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171102-ENSG00000175164 CGP 9606 9:133205277-133275214
GeneTranscriptPositionBiotype
ENSG00000119440 (LCN1P1)
lipocalin 1 pseudogene 1 		ENST00000372031 (LCN1P1-001) 133224905-133228591 unprocessed_pseudogene
ENSG00000171102 (OBP2B)
odorant binding protein 2B 		ENST00000372032 (OBP2B-201) 133205318-133209227 protein_coding
ENST00000372034 (OBP2B-001) 133205277-133209241 protein_coding
ENST00000461961 (OBP2B-003) 133205277-133209241 processed_transcript
ENST00000473737 (OBP2B-002) 133205277-133209241 nonsense_mediated_decay
ENST00000618116 (OBP2B-202) 133205280-133209250 protein_coding
ENSG00000175164 (ABO)
ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) 		ENST00000453660 (ABO-001) 133250401-133275201 processed_transcript
ENST00000538324 (ABO-201) 133255602-133275214 protein_coding
ENST00000611156 (ABO-202) 133255176-133275214 protein_coding
ENSG00000271875 (RP11-430N14.4)
 ENST00000606717 (RP11-430N14.4-001) 133250401-133255563 3prime_overlapping_ncrna
CIL_0006IU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026919-ENSMUSG00000015787 CGP 10090 2:26667674-26864979
GeneTranscriptPositionBiotype
ENSMUSG00000015787 (Abo)
ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase) 		ENSMUST00000102900 (Abo-001) 26842503-26864979 protein_coding
ENSMUST00000114045 (Abo-002) 26842503-26856798 protein_coding
ENSMUSG00000026919 (Lcn4)
lipocalin 4 		ENSMUST00000028283 (Lcn4-001) 26667674-26671282 protein_coding
ENSMUSG00000082951 (Gm13359)
predicted gene 13359 		ENSMUST00000119000 (Gm13359-001) 26722387-26723081 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IU_0001ENSG00000119440ENST00000372031ENSG00000171102ENST00000372032ENST00000372034ENST00000461961ENST00000473737ENST00000618116ENSG00000175164ENST00000453660ENST00000538324ENST00000611156ENSG00000271875ENST00000606717CIL_0006IU_0002ENSMUSG00000015787ENSMUST00000102900ENSMUST00000114045ENSMUSG00000026919ENSMUST00000028283ENSMUSG00000082951ENSMUST00000119000
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IU_0001ENSG00000119440ENST00000372031ENSG00000171102ENST00000372032ENST00000461961ENST00000473737ENST00000618116ENSG00000175164ENST00000453660ENST00000538324ENST00000611156ENSG00000271875ENST00000606717CIL_0006IU_0002ENSMUSG00000015787ENSMUST00000102900ENSMUST00000114045ENSMUSG00000026919ENSMUST00000028283ENSMUSG00000082951ENSMUST00000119000
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119440 ENST00000372031 0.120±0.00 N/A N/A 0.154±0.00 N/A N/A N/A 0.191±0.00 N/A 0.189±0.00 N/A 0.367±0.30 N/A 0.067±0.00
ENSG00000171102 ENST00000372032 N/A N/A N/A N/A 0.171±0.00 N/A N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A
ENST00000372034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461961 N/A N/A N/A 0.160±0.00 0.457±0.00 N/A N/A N/A N/A N/A N/A 0.793±0.00 0.033±0.00 5.230±0.44
ENST00000473737 N/A N/A N/A N/A 0.354±0.00 N/A N/A N/A N/A N/A N/A 0.256±0.15 0.104±0.01 1.086±0.00
ENST00000618116 N/A N/A N/A N/A 0.440±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.652±0.60
ENSG00000175164 ENST00000453660 N/A N/A N/A 0.033±0.00 N/A 0.751±0.00 N/A N/A 0.087±0.00 0.498±0.35 N/A 5.042±0.00 0.162±0.03 N/A
ENST00000538324 N/A N/A N/A 0.253±0.00 N/A 3.408±0.00 N/A N/A N/A 1.786±0.00 N/A 1.486±0.00 N/A N/A
ENST00000611156 1.899±0.00 N/A N/A 0.176±0.00 N/A N/A 0.480±0.45 14.042±0.00 0.193±0.00 N/A 0.569±0.00 N/A N/A 1.746±0.00
ENSG00000271875 ENST00000606717 1.491±0.00 0.099±0.00 1.741±0.00 0.111±0.00 0.816±0.09 0.279±0.01 0.542±0.50 4.858±4.85 0.011±0.00 0.445±0.23 0.056±0.00 11.291±8.15 0.265±0.08 3.467±1.71
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015787 ENSMUST00000102900 N/A N/A 0.009±0.00 0.016±0.00 N/A 3.150±1.23 N/A N/A N/A 0.420±0.28 N/A 0.113±0.04 0.163±0.17 0.972±0.13
ENSMUST00000114045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 0.470±0.40
ENSMUSG00000026919 ENSMUST00000028283 N/A N/A 0.017±0.01 N/A 1.096±0.43 N/A N/A 0.212±0.11 0.033±0.03 0.225±0.07 0.047±0.00 N/A 0.087±0.02 N/A
ENSMUSG00000082951 ENSMUST00000119000 0.124±0.00 N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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