C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: target of myb1-like 2 (chicken)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175662 TOM1L2 9606 - 17:17843511-17972422 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000318094 TOM1L2-010 17846849-17972397 protein_coding
  ENST00000379504 TOM1L2-001 17846825-17972397 protein_coding
  ENST00000395739 TOM1L2-004 17847349-17972404 protein_coding
  ENST00000468944 TOM1L2-005 17861903-17862780 protein_coding
  ENST00000478943 TOM1L2-003 17846825-17872064 protein_coding
  ENST00000486413 TOM1L2-006 17847552-17851303 retained_intron
  ENST00000535933 TOM1L2-007 17847446-17972420 protein_coding
  ENST00000537091 TOM1L2-011 17868965-17972397 retained_intron
  ENST00000540946 TOM1L2-009 17847469-17972397 protein_coding
  ENST00000542206 TOM1L2-008 17847569-17972400 protein_coding
  ENST00000577517 TOM1L2-013 17863274-17872058 processed_transcript
  ENST00000577794 TOM1L2-014 17847334-17848949 retained_intron
  ENST00000579586 TOM1L2-012 17893678-17972422 protein_coding
  ENST00000581396 TOM1L2-002 17843511-17972410 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379504ENST00000395739ENST00000478943ENST00000486413ENST00000535933ENST00000537091ENST00000577794ENST00000581396
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379504 N/A 1.529±0.00 6.847±0.00 2.490±0.00 N/A 7.905±0.00 N/A 3.042±0.00 2.184±0.00 4.241±0.00 1.556±0.00 N/A N/A
ENST00000395739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.196±0.00
ENST00000478943 N/A N/A N/A N/A N/A N/A N/A N/A 1.598±0.00 N/A N/A N/A N/A
ENST00000486413 N/A N/A 16.968±0.00 N/A N/A N/A 1.969±0.00 9.172±0.00 N/A 12.076±0.00 N/A N/A N/A
ENST00000535933 N/A N/A N/A N/A 1.498±0.00 3.801±0.00 N/A N/A 2.461±0.00 N/A N/A N/A N/A
ENST00000537091 N/A N/A N/A N/A N/A N/A 0.713±0.00 N/A N/A N/A N/A N/A N/A
ENST00000577794 N/A 7.112±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581396 1.167±0.00 N/A N/A N/A N/A N/A 2.815±0.00 1.407±0.00 0.918±0.00 N/A 0.932±0.00 0.884±0.00 1.648±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00003N CIL_00003N_0002 CGP 17:17810399-17972422
CIL_00058R CIL_00058R_0002 CGP 17:17843511-18016889

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0006886 IEA intracellular protein transport
GO:0007165 IDA signal transduction
GO:0019901 IPI protein kinase binding
GO:0030276 IDA clathrin binding
GO:0045839 IDA negative regulation of mitosis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056394 TOM1L2 target of myb1-like 2 (chicken) protein_coding Danio_rerio
ENSMUSG00000000538 Tom1l2 target of myb1-like 2 (chicken) protein_coding Mus_musculus

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