C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: target of myb1-like 2 (chicken)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000538 Tom1l2 10090 - 11:60226714-60352905 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064019 Tom1l2-005 60240570-60352905 protein_coding
  ENSMUST00000093046 Tom1l2-009 60226715-60352905 protein_coding
  ENSMUST00000093048 Tom1l2-008 60226715-60352905 protein_coding
  ENSMUST00000095254 Tom1l2-201 60226714-60352905 protein_coding
  ENSMUST00000102682 Tom1l2-003 60240937-60352905 protein_coding
  ENSMUST00000102683 Tom1l2-002 60226715-60352905 protein_coding
  ENSMUST00000133420 Tom1l2-006 60229902-60245157 protein_coding
  ENSMUST00000142225 Tom1l2-007 60252831-60352905 processed_transcript
  ENSMUST00000143124 Tom1l2-004 60229902-60245669 protein_coding
  ENSMUST00000151284 Tom1l2-001 60229603-60231347 processed_transcript
  ENSMUST00000153920 Tom1l2-010 60226715-60239176 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093046ENSMUST00000093048ENSMUST00000095254ENSMUST00000102683ENSMUST00000153920
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093046 N/A 14.520±3.37 N/A N/A N/A N/A N/A N/A 2.203±0.26 N/A N/A 12.232±3.59 N/A N/A
ENSMUST00000093048 N/A N/A N/A 9.779±0.00 N/A N/A N/A N/A N/A N/A N/A 7.199±0.00 2.367±1.11 0.913±0.00
ENSMUST00000095254 3.895±0.59 30.365±3.68 N/A 20.766±18.05 8.447±3.48 18.181±4.44 5.095±0.00 12.701±0.00 2.474±0.86 10.867±3.74 11.436±1.86 25.658±6.91 0.912±0.00 N/A
ENSMUST00000102683 15.031±0.49 N/A 18.235±3.15 30.411±11.77 6.955±2.62 9.919±3.50 19.970±3.68 25.448±3.32 2.595±0.98 12.674±2.05 13.625±1.85 12.413±2.70 5.227±2.96 6.307±0.55
ENSMUST00000153920 9.003±1.03 29.934±3.49 7.792±0.00 3.266±0.00 11.786±3.48 15.089±2.10 5.953±0.00 13.339±2.80 2.135±1.15 12.306±2.41 4.647±0.00 10.520±6.21 1.235±0.25 2.038±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A0 CIL_0009A0_0002 VISTA 11:59693037-60296757
CIL_00003N CIL_00003N_0003 CGP 11:60199089-60352905
CIL_00058R CIL_00058R_0003 CGP 11:60226714-60394341

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0006886 IEA intracellular protein transport
GO:0007165 IEA signal transduction
GO:0019901 IEA protein kinase binding
GO:0030276 IEA clathrin binding
GO:0045839 IEA negative regulation of mitosis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056394 TOM1L2 target of myb1-like 2 (chicken) protein_coding Danio_rerio
ENSG00000175662 TOM1L2 target of myb1-like 2 (chicken) protein_coding Homo_sapiens

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