C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear protein, transcriptional regulator, 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176046 NUPR1 9606 - 16:28532708-28539174 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324873 NUPR1-001 28532708-28539174 protein_coding
  ENST00000395641 NUPR1-002 28537537-28539008 protein_coding
  ENST00000567646 NUPR1-003 28537507-28538951 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000324873ENST00000395641ENST00000567646
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000324873 5.605±0.00 4.931±0.00 0.246±0.00 1.023±0.93 2.855±2.20 5.826±5.30 0.625±0.51 3.302±2.25 1.182±0.11 2.440±1.47 2.968±2.23 3.473±3.38 1.782±0.77 3.309±2.43
ENST00000395641 130.942±0.00 103.811±0.00 2.549±0.00 26.610±0.00 65.335±59.02 140.861±136.10 6.748±5.71 56.084±41.54 22.410±0.00 33.794±28.97 26.921±0.00 19.799±14.38 44.368±0.00 79.232±60.61
ENST00000567646 25.183±0.00 24.114±0.00 N/A N/A 2.328±0.00 N/A 8.373±0.00 N/A 3.996±0.00 N/A 30.184±0.00 6.750±0.00 27.661±12.68 54.989±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TU CIL_0005TU_0001 CGP 16:28499362-28539174
CIL_0004WL CIL_0004WL_0001 CGP 16:28532708-28591790

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002526 IEA acute inflammatory response
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006461 IEA protein complex assembly
GO:0006473 IEA protein acetylation
GO:0008584 IEA male gonad development
GO:0009636 IEA response to toxic substance
GO:0016049 IDA cell growth
GO:0031401 IEA positive regulation of protein modification process
GO:0035914 IEA skeletal muscle cell differentiation
GO:0042771 IEA intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043065 IEA positive regulation of apoptotic process
GO:0045786 IEA negative regulation of cell cycle
GO:0048147 IEA negative regulation of fibroblast proliferation
GO:2000194 IEA regulation of female gonad development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000094557 nupr1 nuclear protein 1 protein_coding Danio_rerio
ENSMUSG00000030717 Nupr1 nuclear protein transcription regulator 1 protein_coding Mus_musculus

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