C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005TU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197272-ENSG00000176046 CGP 9606 16:28499362-28539174
GeneTranscriptPositionBiotype
ENSG00000176046 (NUPR1)
nuclear protein, transcriptional regulator, 1 		ENST00000324873 (NUPR1-001) 28532708-28539174 protein_coding
ENST00000395641 (NUPR1-002) 28537537-28539008 protein_coding
ENST00000567646 (NUPR1-003) 28537507-28538951 nonsense_mediated_decay
ENSG00000197272 (IL27)
interleukin 27 		ENST00000356897 (IL27-001) 28499362-28506834 protein_coding
ENST00000568075 (IL27-002) 28501974-28512051 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0005TU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044701-ENSMUSG00000030717 CGP 10090 7:126589010-126630861
GeneTranscriptPositionBiotype
ENSMUSG00000030717 (Nupr1)
nuclear protein transcription regulator 1 		ENSMUST00000032961 (Nupr1-001) 126623249-126625676 protein_coding
ENSMUST00000131174 (Nupr1-003) 126623252-126627010 retained_intron
ENSMUST00000151105 (Nupr1-002) 126624948-126626016 processed_transcript
ENSMUST00000187609 (Nupr1-006) 126623442-126625475 processed_transcript
ENSMUST00000191192 (Nupr1-005) 126623278-126625344 nonsense_mediated_decay
ENSMUST00000191413 (Nupr1-004) 126624948-126630861 processed_transcript
ENSMUSG00000042759 (Apobr)
apolipoprotein B receptor 		ENSMUST00000039522 (Apobr-001) 126584942-126589112 protein_coding
ENSMUST00000131860 (Apobr-002) 126584991-126587951 processed_transcript
ENSMUST00000137646 (Apobr-003) 126584992-126588370 processed_transcript
ENSMUST00000138558 (Apobr-004) 126587080-126588445 processed_transcript
ENSMUST00000144173 (Apobr-005) 126587674-126588325 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TU_0001ENSG00000176046ENST00000324873ENST00000395641ENST00000567646ENSG00000197272ENST00000356897ENST00000568075CIL_0005TU_0002ENSMUSG00000030717ENSMUST00000032961ENSMUST00000131174ENSMUST00000151105ENSMUST00000187609ENSMUST00000191192ENSMUST00000191413ENSMUSG00000042759ENSMUST00000039522ENSMUST00000131860ENSMUST00000137646ENSMUST00000138558ENSMUST00000144173
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TU_0001ENSG00000176046ENST00000324873ENST00000395641ENST00000567646ENSG00000197272ENST00000356897ENST00000568075CIL_0005TU_0002ENSMUSG00000030717ENSMUST00000032961ENSMUST00000131174ENSMUST00000151105ENSMUST00000187609ENSMUST00000191192ENSMUST00000191413ENSMUSG00000042759ENSMUST00000039522
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000176046 ENST00000324873 5.605±0.00 4.931±0.00 0.246±0.00 1.023±0.93 2.855±2.20 5.826±5.30 0.625±0.51 3.302±2.25 1.182±0.11 2.440±1.47 2.968±2.23 3.473±3.38 1.782±0.77 3.309±2.43
ENST00000395641 130.942±0.00 103.811±0.00 2.549±0.00 26.610±0.00 65.335±59.02 140.861±136.10 6.748±5.71 56.084±41.54 22.410±0.00 33.794±28.97 26.921±0.00 19.799±14.38 44.368±0.00 79.232±60.61
ENST00000567646 25.183±0.00 24.114±0.00 N/A N/A 2.328±0.00 N/A 8.373±0.00 N/A 3.996±0.00 N/A 30.184±0.00 6.750±0.00 27.661±12.68 54.989±0.00
ENSG00000197272 ENST00000356897 N/A 0.103±0.00 N/A N/A 0.059±0.00 0.052±0.00 0.105±0.00 0.093±0.00 0.793±0.00 0.307±0.00 N/A N/A 0.535±0.00 0.109±0.02
ENST00000568075 N/A 0.084±0.00 N/A N/A N/A N/A 0.080±0.00 0.873±0.63 N/A N/A N/A 0.143±0.00 0.381±0.00 0.141±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030717 ENSMUST00000032961 34.887±16.54 1.815±0.63 27.165±2.68 2.884±2.68 18.935±2.15 80.817±12.44 3.463±1.60 14.253±1.51 1.544±1.59 31.786±6.85 4.451±1.12 97.188±48.45 5.897±4.92 0.982±0.32
ENSMUST00000131174 2.496±0.11 0.635±0.23 1.365±0.00 0.058±0.00 6.321±1.86 9.071±1.53 0.507±0.18 0.934±0.30 0.199±0.13 3.455±0.79 N/A 7.320±1.36 0.067±0.01 0.075±0.03
ENSMUST00000151105 N/A N/A N/A N/A N/A N/A N/A N/A 0.283±0.11 N/A N/A N/A N/A N/A
ENSMUST00000187609 N/A N/A N/A N/A N/A N/A N/A N/A 0.263±0.12 N/A N/A 17.899±4.91 N/A N/A
ENSMUST00000191192 N/A N/A N/A 3.490±3.16 N/A N/A 1.143±0.00 N/A 0.960±0.72 N/A 2.189±0.73 130.722±33.35 5.052±3.00 2.488±0.00
ENSMUST00000191413 N/A N/A N/A 12.327±0.00 N/A N/A N/A N/A N/A N/A N/A 197.745±0.00 12.316±0.00 N/A
ENSMUSG00000042759 ENSMUST00000039522 4.642±0.45 N/A 1.704±0.07 0.639±0.00 4.679±0.96 N/A N/A N/A 2.804±1.23 5.409±0.20 0.314±0.03 3.120±0.31 45.798±25.08 0.748±0.00
ENSMUST00000131860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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