C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear protein, transcriptional regulator, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000324873 NUPR1-001 ENSG00000176046 9606 - 16:28532708-28539174 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000324873
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000324873 5.605±0.00 4.931±0.00 0.246±0.00 1.023±0.93 2.855±2.20 5.826±5.30 0.625±0.51 3.302±2.25 1.182±0.11 2.440±1.47 2.968±2.23 3.473±3.38 1.782±0.77 3.309±2.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TU CIL_0005TU_0001 CGP 16:28499362-28539174
CIL_0004WL CIL_0004WL_0001 CGP 16:28532708-28591790

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016049 IDA cell growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030474 Nsun4-002 nonsense_mediated_decay Mus_musculus 0.0004 53

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