C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 101
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000317058 CCDC101-001 ENSG00000176476 9606 + 16:28553926-28591790 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317058
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317058 8.150±0.00 12.762±0.00 0.242±0.00 3.152±0.92 6.301±4.07 10.637±9.10 4.105±2.29 7.497±0.96 5.358±2.57 7.519±0.00 26.786±23.77 34.793±6.46 6.536±3.27 20.846±11.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WL CIL_0004WL_0001 CGP 16:28532708-28591790
CIL_0004WI CIL_0004WI_0001 CGP 16:28553915-28597109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0006325 TAS chromatin organization
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0035064 IDA methylated histone binding
GO:0043966 IDA histone H3 acetylation
GO:0070461 IDA SAGA-type complex
GO:0071169 TAS establishment of protein localization to chromatin

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032956 Ccdc101-001 protein_coding Mus_musculus 0 1184
ENSMUST00000129786 Ccdc101-007 retained_intron Mus_musculus 0 577
ENSMUST00000152231 Ccdc101-006 retained_intron Mus_musculus 0 571
ENSMUST00000123382 Ccdc101-008 processed_transcript Mus_musculus 0 436
ENSMUST00000123274 Ccdc101-004 retained_intron Mus_musculus 0 206
ENSMUST00000138794 Ccdc101-005 retained_intron Mus_musculus 0 198
ENSMUST00000126570 Ccdc101-002 processed_transcript Mus_musculus 9e-34 148
ENSMUST00000123571 Ccdc101-003 processed_transcript Mus_musculus 4e-22 110

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