C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 101
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000567564 CCDC101-004 ENSG00000176476 9606 + 16:28553972-28590441 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungOvaryPlacentaTestisENST00000567564
Transcript ID Liver Lung Ovary Placenta Testis
ENST00000567564 2.048±0.00 1.755±0.00 12.967±0.00 15.552±0.00 79.022±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WL CIL_0004WL_0001 CGP 16:28532708-28591790
CIL_0004WI CIL_0004WI_0001 CGP 16:28553915-28597109

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032956 Ccdc101-001 protein_coding Mus_musculus 0 453
ENSMUST00000129786 Ccdc101-007 retained_intron Mus_musculus 0 318
ENSMUST00000152231 Ccdc101-006 retained_intron Mus_musculus 0 298
ENSMUST00000123274 Ccdc101-004 retained_intron Mus_musculus 0 202
ENSMUST00000138794 Ccdc101-005 retained_intron Mus_musculus 0 198
ENSMUST00000126570 Ccdc101-002 processed_transcript Mus_musculus 6e-34 148
ENSMUST00000123571 Ccdc101-003 processed_transcript Mus_musculus 4e-21 106

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