C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sterile alpha motif domain containing 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177570 SAMD12 9606 - 8:118189459-118621995 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000314727 SAMD12-001 118377988-118621953 protein_coding
  ENST00000409003 SAMD12-201 118189459-118621945 protein_coding
  ENST00000445741 SAMD12-005 118239866-118621893 nonsense_mediated_decay
  ENST00000453675 SAMD12-006 118196173-118580895 protein_coding
  ENST00000524796 SAMD12-003 118197547-118580882 protein_coding
  ENST00000526328 SAMD12-002 118379560-118621945 protein_coding
  ENST00000526765 SAMD12-004 118379560-118621995 protein_coding
  ENST00000527515 SAMD12-007 118375701-118379605 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000314727ENST00000409003ENST00000453675ENST00000524796ENST00000526328
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000314727 N/A 1.669±0.00 N/A N/A N/A 0.631±0.00 N/A N/A N/A N/A 2.814±0.00 N/A N/A
ENST00000409003 0.550±0.00 0.829±0.00 5.896±1.07 1.503±0.00 0.889±0.67 0.673±0.18 2.140±0.00 1.195±0.00 2.408±0.00 0.042±0.00 1.123±0.51 0.008±0.00 0.663±0.13
ENST00000453675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.251±0.00 0.017±0.00 N/A
ENST00000524796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A
ENST00000526328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.138±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RK CIL_0005RK_0001 CGP 8:117794490-118621995

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000058656 Samd12 sterile alpha motif domain containing 12 protein_coding Mus_musculus

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