C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sterile alpha motif domain containing 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000058656 Samd12 10090 - 15:53461621-53902537 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000078673 Samd12-001 53461801-53902530 protein_coding
  ENSMUST00000132059 Samd12-004 53462194-53902381 nonsense_mediated_decay
  ENSMUST00000132362 Samd12-003 53818794-53902537 processed_transcript
  ENSMUST00000154119 Samd12-002 53461621-53902537 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078673ENSMUST00000132059ENSMUST00000132362ENSMUST00000154119
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078673 0.768±0.28 0.303±0.05 N/A 0.202±0.10 1.179±0.58 0.356±0.20 0.431±0.13 0.051±0.05 1.085±0.00 0.112±0.01 1.288±0.42 0.216±0.14 0.055±0.02
ENSMUST00000132059 N/A 0.622±0.00 12.027±0.00 N/A N/A N/A N/A 0.024±0.00 N/A 0.240±0.00 1.807±0.12 2.291±0.16 0.156±0.00
ENSMUST00000132362 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.299±0.00 N/A N/A N/A
ENSMUST00000154119 0.558±0.00 N/A N/A 0.094±0.00 0.418±0.11 N/A N/A 0.013±0.00 N/A 0.094±0.03 0.477±0.04 0.238±0.11 0.030±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RK CIL_0005RK_0002 CGP 15:53064038-53902537

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000177570 SAMD12 sterile alpha motif domain containing 12 protein_coding Homo_sapiens

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