C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sterile alpha motif domain containing 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000314727 SAMD12-001 ENSG00000177570 9606 - 8:118377988-118621953 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartOvaryENST00000314727
Transcript ID Bladder Heart Ovary
ENST00000314727 1.669±0.00 0.631±0.00 2.814±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RK CIL_0005RK_0001 CGP 8:117794490-118621995

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078673 Samd12-001 protein_coding Mus_musculus 0 835
ENSMUST00000154119 Samd12-002 processed_transcript Mus_musculus 0 377
ENSMUST00000132059 Samd12-004 nonsense_mediated_decay Mus_musculus 0 272
ENSMUST00000132362 Samd12-003 processed_transcript Mus_musculus 0 252

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