C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sterile alpha motif domain containing 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409003 SAMD12-201 ENSG00000177570 9606 - 8:118189459-118621945 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409003
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409003 0.550±0.00 0.829±0.00 5.896±1.07 1.503±0.00 0.889±0.67 0.673±0.18 2.140±0.00 1.195±0.00 2.408±0.00 0.042±0.00 1.123±0.51 0.008±0.00 0.663±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RK CIL_0005RK_0001 CGP 8:117794490-118621995

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078673 Samd12-001 protein_coding Mus_musculus 0 1158
ENSMUST00000154119 Samd12-002 processed_transcript Mus_musculus 0 377
ENSMUST00000132059 Samd12-004 nonsense_mediated_decay Mus_musculus 0 272
ENSMUST00000132362 Samd12-003 processed_transcript Mus_musculus 0 252

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