C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 1, regulatory subunit 42
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000178125 PPP1R42 9606 - 8:66964099-67056604 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324682 PPP1R42-001 66988131-67028551 protein_coding
  ENST00000517834 PPP1R42-013 67012898-67056604 processed_transcript
  ENST00000518588 PPP1R42-007 66982038-67013005 processed_transcript
  ENST00000519919 PPP1R42-004 67010615-67014498 processed_transcript
  ENST00000519987 PPP1R42-006 66964103-67010782 processed_transcript
  ENST00000520633 PPP1R42-003 67010618-67028537 processed_transcript
  ENST00000521040 PPP1R42-005 66964205-67014538 processed_transcript
  ENST00000521410 PPP1R42-008 66964103-67012981 processed_transcript
  ENST00000521581 PPP1R42-012 67014507-67028561 processed_transcript
  ENST00000521998 PPP1R42-010 66964099-66982134 processed_transcript
  ENST00000522331 PPP1R42-009 66964103-66982187 processed_transcript
  ENST00000522909 PPP1R42-011 66964200-67021345 protein_coding
  ENST00000523545 PPP1R42-002 67014525-67028520 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BD CIL_0003BD_0001 CGP 8:66946501-67056604
CIL_0003BC CIL_0003BC_0001 CGP 8:66964099-67083783

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002177 ISS manchette
GO:0003779 ISS actin binding
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005813 ISS centrosome
GO:0005815 ISS microtubule organizing center
GO:0010921 IEA regulation of phosphatase activity
GO:0015630 ISS microtubule cytoskeleton
GO:0015631 ISS tubulin binding
GO:0045502 ISS dynein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057632 ppp1r42 protein phosphatase 1, regulatory subunit 42 protein_coding Danio_rerio
ENSMUSG00000025916 Ppp1r42 protein phosphatase 1, regulatory subunit 42 protein_coding Mus_musculus

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