C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | protein phosphatase 1, regulatory subunit 42 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000517834  |
PPP1R42-013 |
ENSG00000178125 |
9606 | - |
8:67012898-67056604  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003BD | CIL_0003BD_0001 | CGP | 8:66946501-67056604 |
| CIL_0003BC | CIL_0003BC_0001 | CGP | 8:66964099-67083783 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000186528
|
Cops5-006 | nonsense_mediated_decay | Mus_musculus | 0 | 309 |
|
ENSMUST00000027050
|
Cops5-001 | protein_coding | Mus_musculus | 0 | 309 |
|
ENSMUST00000155163
|
Ppp1r42-003 | retained_intron | Mus_musculus | 0 | 191 |
|
ENSMUST00000176398
|
Ppp1r42-007 | protein_coding | Mus_musculus | 0 | 191 |
|
ENSMUST00000130102
|
Ppp1r42-002 | nonsense_mediated_decay | Mus_musculus | 0 | 191 |
|
ENSMUST00000027049
|
Ppp1r42-001 | protein_coding | Mus_musculus | 0 | 191 |
|
ENSMUST00000124874
|
Ppp1r42-006 | nonsense_mediated_decay | Mus_musculus | 0 | 191 |
|
ENSMUST00000188619
|
Cops5-005 | protein_coding | Mus_musculus | 1.4013e-45 | 187 |
|
ENSMUST00000190155
|
Cops5-007 | nonsense_mediated_decay | Mus_musculus | 1e-39 | 167 |
|
ENSMUST00000139578
|
Cops5-003 | retained_intron | Mus_musculus | 2e-32 | 143 |
