C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 43
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000180329 CCDC43 9606 - 17:44673069-44689779 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000315286 CCDC43-001 44677458-44689762 protein_coding
  ENST00000457422 CCDC43-003 44677440-44689779 protein_coding
  ENST00000588210 CCDC43-002 44677483-44689763 protein_coding
  ENST00000588687 CCDC43-005 44673069-44689725 protein_coding
  ENST00000592333 CCDC43-004 44681731-44689745 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000315286ENST00000457422ENST00000588210ENST00000592333
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000315286 4.817±0.00 4.964±0.00 0.906±0.00 6.118±2.51 3.582±1.19 3.809±0.25 4.008±0.85 2.215±1.91 1.540±0.86 4.338±0.00 6.476±5.14 5.420±1.62 4.130±0.55 7.595±0.00
ENST00000457422 1.455±0.00 1.873±0.00 1.259±0.00 2.173±0.33 1.689±0.29 N/A 3.164±0.00 N/A 1.222±0.59 1.263±0.00 4.014±1.05 2.658±1.87 1.938±1.58 N/A
ENST00000588210 N/A N/A N/A N/A N/A 1.322±0.00 N/A N/A N/A 0.977±0.00 N/A 4.793±0.00 2.058±0.00 N/A
ENST00000592333 N/A N/A N/A N/A N/A N/A N/A 0.945±0.00 N/A N/A N/A 4.917±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ST CIL_0007ST_0001 VISTA 17:44247434-44848646
CIL_0005IY CIL_0005IY_0001 CGP 17:44557459-44690308
CIL_0003CO CIL_0003CO_0001 CGP 17:44656404-44690308

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054446 ccdc43 coiled-coil domain containing 43 protein_coding Danio_rerio
ENSMUSG00000020925 Ccdc43 coiled-coil domain containing 43 protein_coding Mus_musculus

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