C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000315286 CCDC43-001 ENSG00000180329 9606 - 17:44677458-44689762 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000315286
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000315286 4.817±0.00 4.964±0.00 0.906±0.00 6.118±2.51 3.582±1.19 3.809±0.25 4.008±0.85 2.215±1.91 1.540±0.86 4.338±0.00 6.476±5.14 5.420±1.62 4.130±0.55 7.595±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ST CIL_0007ST_0001 VISTA 17:44247434-44848646
CIL_0005IY CIL_0005IY_0001 CGP 17:44557459-44690308
CIL_0003CO CIL_0003CO_0001 CGP 17:44656404-44690308

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092569 Ccdc43-001 protein_coding Mus_musculus 0 808
ENSMUST00000164506 Ccdc43-201 protein_coding Mus_musculus 0 797
ENSMUST00000124869 Ccdc43-003 processed_transcript Mus_musculus 0 219

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