C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 43
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020925 Ccdc43 10090 - 11:102684686-102697782 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000092569 Ccdc43-001 102684686-102697782 protein_coding
  ENSMUST00000124869 Ccdc43-003 102686340-102697536 processed_transcript
  ENSMUST00000138147 Ccdc43-004 102689710-102697670 processed_transcript
  ENSMUST00000153157 Ccdc43-002 102688319-102697734 processed_transcript
  ENSMUST00000164506 Ccdc43-201 102684688-102697734 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000092569ENSMUST00000124869ENSMUST00000138147ENSMUST00000153157ENSMUST00000164506
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000092569 0.999±0.09 N/A 5.083±0.34 4.543±1.55 0.834±0.28 0.529±0.09 1.190±0.35 0.944±0.42 5.470±1.21 0.796±0.05 23.520±1.18 3.120±2.71 5.160±1.11 0.829±0.53
ENSMUST00000124869 N/A N/A N/A 23.154±0.00 N/A N/A N/A N/A N/A N/A N/A 36.407±0.00 27.993±1.14 30.579±0.00
ENSMUST00000138147 N/A N/A N/A N/A N/A N/A N/A N/A 0.819±0.00 N/A N/A 0.780±0.07 N/A 0.951±0.00
ENSMUST00000153157 3.230±0.46 3.043±0.90 2.510±0.00 2.206±0.00 3.773±1.80 2.018±0.33 2.092±0.21 2.522±0.46 2.672±0.46 1.962±0.47 N/A 2.602±1.26 3.288±1.68 2.956±0.59
ENSMUST00000164506 N/A 0.795±0.02 N/A N/A 0.700±0.00 1.109±0.00 0.662±0.00 0.784±0.28 1.036±0.27 N/A N/A 0.473±0.18 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ST CIL_0007ST_0002 VISTA 11:102292756-102896210
CIL_0003CO CIL_0003CO_0002 CGP 11:102663716-102697782

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054446 ccdc43 coiled-coil domain containing 43 protein_coding Danio_rerio
ENSG00000180329 CCDC43 coiled-coil domain containing 43 protein_coding Homo_sapiens

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