C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: multiple coagulation factor deficiency 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000180398 MCFD2 9606 - 2:46901870-46941855 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319466 MCFD2-001 46901874-46915868 protein_coding
  ENST00000409105 MCFD2-002 46901874-46915780 protein_coding
  ENST00000409147 MCFD2-010 46905368-46941855 protein_coding
  ENST00000409207 MCFD2-003 46904958-46941732 protein_coding
  ENST00000409218 MCFD2-005 46905394-46916112 protein_coding
  ENST00000409800 MCFD2-008 46901874-46916054 protein_coding
  ENST00000409913 MCFD2-009 46901874-46915816 protein_coding
  ENST00000409973 MCFD2-004 46905271-46915810 protein_coding
  ENST00000412438 MCFD2-006 46905466-46914118 protein_coding
  ENST00000417180 MCFD2-007 46907935-46914074 protein_coding
  ENST00000434262 MCFD2-011 46905817-46909072 protein_coding
  ENST00000444761 MCFD2-201 46901870-46941855 protein_coding
  ENST00000470873 MCFD2-015 46905245-46941773 processed_transcript
  ENST00000477791 MCFD2-014 46907529-46915791 retained_intron
  ENST00000479225 MCFD2-012 46907700-46941714 retained_intron
  ENST00000487121 MCFD2-013 46908707-46941727 retained_intron
  ENST00000493804 MCFD2-016 46904855-46915789 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319466ENST00000409800ENST00000409913
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319466 24.323±0.00 21.245±0.00 12.480±6.33 18.422±6.50 13.419±6.02 5.089±1.66 18.139±0.53 20.663±12.54 17.075±8.49 16.699±0.00 21.278±11.16 27.125±3.47 23.560±9.27
ENST00000409800 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.381±0.00 N/A N/A N/A
ENST00000409913 N/A N/A 7.322±1.62 N/A N/A 5.839±4.14 N/A 3.803±1.50 5.676±0.00 5.274±0.00 8.829±3.92 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KK CIL_0006KK_0001 CGP 2:46698952-46941855
CIL_0008D2 CIL_0008D2_0001 VISTA 2:46768636-47372293
CIL_0003T5 CIL_0003T5_0002 CGP 2:46901870-47076137

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0015031 IEA protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039757 mcfd2 multiple coagulation factor deficiency 2 protein_coding Danio_rerio
ENSMUSG00000024150 Mcfd2 multiple coagulation factor deficiency 2 protein_coding Mus_musculus

Loading