C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: multiple coagulation factor deficiency 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024150 Mcfd2 10090 - 17:87254658-87265935 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024963 Mcfd2-001 87254658-87265935 protein_coding
  ENSMUST00000129616 Mcfd2-005 87255788-87265880 protein_coding
  ENSMUST00000139258 Mcfd2-006 87258783-87265863 processed_transcript
  ENSMUST00000144236 Mcfd2-002 87254660-87265904 protein_coding
  ENSMUST00000145895 Mcfd2-007 87256758-87265874 protein_coding
  ENSMUST00000151155 Mcfd2-003 87255970-87265895 protein_coding
  ENSMUST00000155904 Mcfd2-004 87257231-87265880 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024963ENSMUST00000129616ENSMUST00000139258ENSMUST00000144236ENSMUST00000151155
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024963 33.084±5.28 66.836±5.38 36.816±3.41 13.286±1.63 26.885±6.67 37.996±3.50 15.936±4.47 42.009±7.26 61.769±27.19 31.625±7.14 10.987±2.64 48.094±14.10 37.763±24.26 9.472±2.25
ENSMUST00000129616 N/A N/A N/A 17.948±0.00 N/A N/A 6.291±0.00 N/A N/A N/A N/A 22.147±3.70 N/A 7.104±0.66
ENSMUST00000139258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.645±0.00
ENSMUST00000144236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.503±0.16 7.708±0.00 N/A N/A
ENSMUST00000151155 N/A 39.863±4.84 N/A N/A N/A N/A N/A N/A 37.639±0.00 N/A N/A 24.087±0.14 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D2 CIL_0008D2_0002 VISTA 17:87075116-87678515
CIL_0006KK CIL_0006KK_0002 CGP 17:87107679-87265935
CIL_0003T5 CIL_0003T5_0003 CGP 17:87254658-87381769

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005576 ISA extracellular region
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0015031 IEA protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0019752 ISA carboxylic acid metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039757 mcfd2 multiple coagulation factor deficiency 2 protein_coding Danio_rerio
ENSG00000180398 MCFD2 multiple coagulation factor deficiency 2 protein_coding Homo_sapiens

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