C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: praja ring finger 1, E3 ubiquitin protein ligase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181191 PJA1 9606 - X:69160851-69165793 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361478 PJA1-001 69160862-69165521 protein_coding
  ENST00000374571 PJA1-006 69160891-69165793 protein_coding
  ENST00000374583 PJA1-005 69160854-69163545 protein_coding
  ENST00000374584 PJA1-002 69160854-69165437 protein_coding
  ENST00000471141 PJA1-003 69160851-69162694 protein_coding
  ENST00000477231 PJA1-004 69162326-69165449 processed_transcript
  ENST00000590146 PJA1-007 69162805-69165451 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361478ENST00000374571ENST00000374583ENST00000374584ENST00000477231ENST00000590146
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361478 N/A 0.721±0.00 N/A N/A 8.500±0.00 N/A 2.139±0.00 2.270±0.00 0.980±0.00 5.714±0.00 N/A 5.141±0.00 2.156±0.00 N/A
ENST00000374571 8.394±0.00 2.015±0.00 0.598±0.00 10.750±4.03 4.141±0.91 2.841±0.93 1.122±0.24 2.645±1.86 1.794±1.39 3.609±0.00 N/A 10.887±9.27 10.017±0.84 7.868±2.44
ENST00000374583 N/A N/A N/A N/A N/A N/A 0.275±0.00 N/A 1.510±0.00 1.792±0.00 N/A 2.157±0.00 N/A 4.163±0.00
ENST00000374584 4.746±0.00 2.758±0.00 N/A 10.142±0.00 2.999±0.00 5.623±0.00 0.459±0.00 2.105±1.20 N/A N/A 1.641±1.11 0.741±0.00 3.151±0.00 10.737±0.00
ENST00000477231 N/A 2.982±0.00 0.735±0.00 10.574±0.00 N/A 4.788±0.00 N/A N/A N/A N/A 2.292±0.00 N/A 5.667±0.00 11.326±0.00
ENST00000590146 N/A N/A 1.410±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TA CIL_0001TA_0001 CGP X:68828997-69165793
CIL_0002RH CIL_0002RH_0001 CGP X:69160851-69532508

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030163 IEA protein catabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022893 pja2 praja ring finger 2 protein_coding Danio_rerio
ENSMUSG00000034403 Pja1 praja ring finger 1, E3 ubiquitin protein ligase protein_coding Mus_musculus

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