C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002RH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000181191-ENSG00000130054 CGP 9606 X:69160851-69532508
GeneTranscriptPositionBiotype
ENSG00000130054 (FAM155B)
family with sequence similarity 155, member B 		ENST00000252338 (FAM155B-001) 69505241-69532508 protein_coding
ENSG00000172186 (HMGN1P35)
high mobility group nucleosome binding domain 1 pseudogene 35 		ENST00000303758 (HMGN1P35-001) 69174124-69174717 processed_pseudogene
ENSG00000181191 (PJA1)
praja ring finger 1, E3 ubiquitin protein ligase 		ENST00000361478 (PJA1-001) 69160862-69165521 protein_coding
ENST00000374571 (PJA1-006) 69160891-69165793 protein_coding
ENST00000374583 (PJA1-005) 69160854-69163545 protein_coding
ENST00000374584 (PJA1-002) 69160854-69165437 protein_coding
ENST00000471141 (PJA1-003) 69160851-69162694 protein_coding
ENST00000477231 (PJA1-004) 69162326-69165449 processed_transcript
ENST00000590146 (PJA1-007) 69162805-69165451 protein_coding
ENSG00000215162 (LINC00269)
long intergenic non-protein coding RNA 269 		ENST00000399711 (LINC00269-001) 69179557-69209924 lincRNA
ENSG00000231706 (CYCSP43)
cytochrome c, somatic pseudogene 43 		ENST00000438233 (CYCSP43-001) 69485343-69485652 processed_pseudogene
ENSG00000264604 (AL158069.1)
 ENST00000579664 (AL158069.1-201) 69504705-69504823 miRNA
CIL_0002RH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034403-ENSMUSG00000071719 CGP 10090 X:99465734-99848790
GeneTranscriptPositionBiotype
ENSMUSG00000034403 (Pja1)
praja ring finger 1, E3 ubiquitin protein ligase 		ENSMUST00000036354 (Pja1-002) 99466114-99470692 protein_coding
ENSMUST00000113790 (Pja1-004) 99465738-99470687 protein_coding
ENSMUST00000113792 (Pja1-001) 99465734-99471273 protein_coding
ENSMUST00000113797 (Pja1-003) 99466146-99470672 protein_coding
ENSMUST00000167246 (Pja1-201) 99465768-99470735 protein_coding
ENSMUSG00000071719 (Tmem28)
transmembrane protein 28 		ENSMUST00000096363 (Tmem28-001) 99821021-99848790 protein_coding
ENSMUSG00000083552 (Gm14814)
predicted gene 14814 		ENSMUST00000118130 (Gm14814-001) 99765803-99766107 processed_pseudogene
ENSMUSG00000083682 (Pcna-ps1)
proliferating cell nuclear antigen pseudogene 1 		ENSMUST00000118453 (Pcna-ps1-001) 99796471-99797663 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RH_0001ENSG00000130054ENST00000252338ENSG00000172186ENST00000303758ENSG00000181191ENST00000361478ENST00000374571ENST00000374583ENST00000374584ENST00000471141ENST00000477231ENST00000590146ENSG00000215162ENST00000399711ENSG00000231706ENST00000438233ENSG00000264604ENST00000579664CIL_0002RH_0002ENSMUSG00000034403ENSMUST00000036354ENSMUST00000113790ENSMUST00000113792ENSMUST00000113797ENSMUST00000167246ENSMUSG00000071719ENSMUST00000096363ENSMUSG00000083552ENSMUST00000118130ENSMUSG00000083682ENSMUST00000118453
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RH_0001ENSG00000130054ENST00000252338ENSG00000172186ENST00000303758ENSG00000181191ENST00000361478ENST00000374571ENST00000374583ENST00000374584ENST00000477231ENST00000590146ENSG00000215162ENST00000399711ENSG00000231706ENST00000438233ENSG00000264604ENST00000579664CIL_0002RH_0002ENSMUSG00000034403ENSMUST00000036354ENSMUST00000113790ENSMUST00000113797ENSMUST00000167246ENSMUSG00000071719ENSMUST00000096363ENSMUSG00000083552ENSMUST00000118130ENSMUSG00000083682ENSMUST00000118453
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130054 ENST00000252338 N/A 0.028±0.00 0.176±0.00 0.392±0.20 0.046±0.02 0.036±0.01 7.648±7.07 1.359±0.00 0.119±0.00 0.132±0.00 0.100±0.00 0.211±0.15 0.039±0.01 1.721±0.04
ENSG00000172186 ENST00000303758 N/A N/A N/A 0.020±0.00 N/A N/A 0.019±0.00 0.058±0.00 0.017±0.00 N/A N/A 0.031±0.00 0.065±0.00 N/A
ENSG00000181191 ENST00000361478 N/A 0.721±0.00 N/A N/A 8.500±0.00 N/A 2.139±0.00 2.270±0.00 0.980±0.00 5.714±0.00 N/A 5.141±0.00 2.156±0.00 N/A
ENST00000374571 8.394±0.00 2.015±0.00 0.598±0.00 10.750±4.03 4.141±0.91 2.841±0.93 1.122±0.24 2.645±1.86 1.794±1.39 3.609±0.00 N/A 10.887±9.27 10.017±0.84 7.868±2.44
ENST00000374583 N/A N/A N/A N/A N/A N/A 0.275±0.00 N/A 1.510±0.00 1.792±0.00 N/A 2.157±0.00 N/A 4.163±0.00
ENST00000374584 4.746±0.00 2.758±0.00 N/A 10.142±0.00 2.999±0.00 5.623±0.00 0.459±0.00 2.105±1.20 N/A N/A 1.641±1.11 0.741±0.00 3.151±0.00 10.737±0.00
ENST00000471141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477231 N/A 2.982±0.00 0.735±0.00 10.574±0.00 N/A 4.788±0.00 N/A N/A N/A N/A 2.292±0.00 N/A 5.667±0.00 11.326±0.00
ENST00000590146 N/A N/A 1.410±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000215162 ENST00000399711 0.021±0.00 0.129±0.00 0.051±0.00 0.092±0.07 0.126±0.00 0.061±0.00 0.026±0.00 0.093±0.00 N/A 0.006±0.00 0.024±0.00 0.046±0.02 0.015±0.00 0.078±0.05
ENSG00000231706 ENST00000438233 N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A 0.044±0.00 N/A N/A N/A N/A N/A
ENSG00000264604 ENST00000579664 N/A N/A N/A N/A N/A N/A 6.784±1.77 1.132±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034403 ENSMUST00000036354 2.756±0.25 N/A 3.809±0.64 N/A 1.078±0.00 N/A N/A 2.626±0.10 2.346±0.44 2.739±0.00 0.726±0.22 11.572±4.05 6.745±3.21 7.919±2.38
ENSMUST00000113790 5.580±1.68 23.174±4.41 4.367±0.89 20.012±1.32 7.060±3.25 9.659±1.14 1.695±0.00 5.233±1.72 6.554±3.14 6.094±1.92 N/A 30.094±8.28 5.962±1.49 N/A
ENSMUST00000113792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113797 12.813±1.40 8.667±1.00 9.697±0.18 53.283±31.86 8.695±5.46 5.442±0.81 6.306±0.54 12.232±3.47 5.710±1.32 7.450±2.98 2.322±0.56 19.085±14.42 14.381±7.91 10.351±1.38
ENSMUST00000167246 8.747±2.18 19.885±0.96 14.232±2.36 37.867±7.05 5.144±2.52 12.516±1.56 3.712±0.77 11.182±1.75 9.395±2.67 9.547±1.35 2.464±0.77 25.301±4.59 8.075±3.79 15.070±6.95
ENSMUSG00000071719 ENSMUST00000096363 0.039±0.02 1.139±0.18 0.050±0.01 2.680±0.25 0.774±0.22 0.159±0.07 0.021±0.00 0.440±0.04 0.008±0.01 1.252±0.38 0.041±0.02 0.191±0.07 0.017±0.00 0.083±0.03
ENSMUSG00000083552 ENSMUST00000118130 1.056±0.12 0.467±0.11 0.314±0.07 0.494±0.06 0.676±0.22 N/A N/A 0.364±0.13 0.491±0.40 0.290±0.03 N/A 2.208±0.76 0.637±0.40 1.011±0.06
ENSMUSG00000083682 ENSMUST00000118453 N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A

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