C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: praja ring finger 1, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374571 PJA1-006 ENSG00000181191 9606 - X:69160891-69165793 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000374571
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000374571 8.394±0.00 2.015±0.00 0.598±0.00 10.750±4.03 4.141±0.91 2.841±0.93 1.122±0.24 2.645±1.86 1.794±1.39 3.609±0.00 10.887±9.27 10.017±0.84 7.868±2.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TA CIL_0001TA_0001 CGP X:68828997-69165793
CIL_0002RH CIL_0002RH_0001 CGP X:69160851-69532508

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167246 Pja1-201 protein_coding Mus_musculus 0 950
ENSMUST00000113790 Pja1-004 protein_coding Mus_musculus 0 950
ENSMUST00000113797 Pja1-003 protein_coding Mus_musculus 0 950
ENSMUST00000036354 Pja1-002 protein_coding Mus_musculus 0 950
ENSMUST00000113792 Pja1-001 protein_coding Mus_musculus 0 950

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