C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001TA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000090776-ENSG00000181191 CGP 9606 X:68828997-69165793
GeneTranscriptPositionBiotype
ENSG00000090776 (EFNB1)
ephrin-B1
ENST00000204961 (EFNB1-001) 68828997-68842147 protein_coding
ENSG00000181191 (PJA1)
praja ring finger 1, E3 ubiquitin protein ligase
ENST00000361478 (PJA1-001) 69160862-69165521 protein_coding
ENST00000374571 (PJA1-006) 69160891-69165793 protein_coding
ENST00000374583 (PJA1-005) 69160854-69163545 protein_coding
ENST00000374584 (PJA1-002) 69160854-69165437 protein_coding
ENST00000471141 (PJA1-003) 69160851-69162694 protein_coding
ENST00000477231 (PJA1-004) 69162326-69165449 processed_transcript
ENST00000590146 (PJA1-007) 69162805-69165451 protein_coding
CIL_0001TA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031217-ENSMUSG00000034403 CGP 10090 X:99136130-99471273
GeneTranscriptPositionBiotype
ENSMUSG00000031217 (Efnb1)
ephrin B1
ENSMUST00000052839 (Efnb1-001) 99136130-99148991 protein_coding
ENSMUST00000151750 (Efnb1-002) 99138131-99147230 processed_transcript
ENSMUSG00000034403 (Pja1)
praja ring finger 1, E3 ubiquitin protein ligase
ENSMUST00000036354 (Pja1-002) 99466114-99470692 protein_coding
ENSMUST00000113790 (Pja1-004) 99465738-99470687 protein_coding
ENSMUST00000113792 (Pja1-001) 99465734-99471273 protein_coding
ENSMUST00000113797 (Pja1-003) 99466146-99470672 protein_coding
ENSMUST00000167246 (Pja1-201) 99465768-99470735 protein_coding
ENSMUSG00000073051 (Gm14812)
predicted gene 14812
ENSMUST00000156494 (Gm14812-001) 99405331-99443797 lincRNA
ENSMUSG00000085053 (Gm14809)
predicted gene 14809
ENSMUST00000152025 (Gm14809-001) 99409571-99418895 lincRNA
ENSMUSG00000085553 (Gm14808)
predicted gene 14808
ENSMUST00000129259 (Gm14808-001) 99459025-99460753 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TA_0001ENSG00000090776ENST00000204961ENSG00000181191ENST00000361478ENST00000374571ENST00000374583ENST00000374584ENST00000471141ENST00000477231ENST00000590146CIL_0001TA_0002ENSMUSG00000031217ENSMUST00000052839ENSMUST00000151750ENSMUSG00000034403ENSMUST00000036354ENSMUST00000113790ENSMUST00000113792ENSMUST00000113797ENSMUST00000167246ENSMUSG00000073051ENSMUST00000156494ENSMUSG00000085053ENSMUST00000152025ENSMUSG00000085553ENSMUST00000129259
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TA_0001ENSG00000090776ENST00000204961ENSG00000181191ENST00000361478ENST00000374571ENST00000374583ENST00000374584ENST00000477231ENST00000590146CIL_0001TA_0002ENSMUSG00000031217ENSMUST00000052839ENSMUST00000151750ENSMUSG00000034403ENSMUST00000036354ENSMUST00000113790ENSMUST00000113797ENSMUST00000167246ENSMUSG00000073051ENSMUST00000156494ENSMUSG00000085053ENSMUST00000152025ENSMUSG00000085553ENSMUST00000129259
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000090776 ENST00000204961 95.179±0.00 8.522±0.00 0.611±0.00 1.738±1.14 10.685±8.30 8.854±6.47 3.795±2.37 13.389±12.61 3.338±0.06 16.388±12.65 1.268±0.87 15.953±9.31 40.758±4.91 6.777±1.86
ENSG00000181191 ENST00000361478 N/A 0.721±0.00 N/A N/A 8.500±0.00 N/A 2.139±0.00 2.270±0.00 0.980±0.00 5.714±0.00 N/A 5.141±0.00 2.156±0.00 N/A
ENST00000374571 8.394±0.00 2.015±0.00 0.598±0.00 10.750±4.03 4.141±0.91 2.841±0.93 1.122±0.24 2.645±1.86 1.794±1.39 3.609±0.00 N/A 10.887±9.27 10.017±0.84 7.868±2.44
ENST00000374583 N/A N/A N/A N/A N/A N/A 0.275±0.00 N/A 1.510±0.00 1.792±0.00 N/A 2.157±0.00 N/A 4.163±0.00
ENST00000374584 4.746±0.00 2.758±0.00 N/A 10.142±0.00 2.999±0.00 5.623±0.00 0.459±0.00 2.105±1.20 N/A N/A 1.641±1.11 0.741±0.00 3.151±0.00 10.737±0.00
ENST00000471141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477231 N/A 2.982±0.00 0.735±0.00 10.574±0.00 N/A 4.788±0.00 N/A N/A N/A N/A 2.292±0.00 N/A 5.667±0.00 11.326±0.00
ENST00000590146 N/A N/A 1.410±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031217 ENSMUST00000052839 14.863±0.93 14.964±3.16 10.840±0.89 15.689±10.74 8.242±3.45 31.919±5.69 5.113±0.07 10.373±1.57 3.428±0.41 48.486±14.20 2.242±0.43 26.245±8.42 25.820±12.06 3.269±1.31
ENSMUST00000151750 N/A N/A N/A 7.142±0.00 3.353±0.00 N/A N/A N/A N/A N/A N/A 29.025±25.36 77.181±31.04 6.340±0.00
ENSMUSG00000034403 ENSMUST00000036354 2.756±0.25 N/A 3.809±0.64 N/A 1.078±0.00 N/A N/A 2.626±0.10 2.346±0.44 2.739±0.00 0.726±0.22 11.572±4.05 6.745±3.21 7.919±2.38
ENSMUST00000113790 5.580±1.68 23.174±4.41 4.367±0.89 20.012±1.32 7.060±3.25 9.659±1.14 1.695±0.00 5.233±1.72 6.554±3.14 6.094±1.92 N/A 30.094±8.28 5.962±1.49 N/A
ENSMUST00000113792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113797 12.813±1.40 8.667±1.00 9.697±0.18 53.283±31.86 8.695±5.46 5.442±0.81 6.306±0.54 12.232±3.47 5.710±1.32 7.450±2.98 2.322±0.56 19.085±14.42 14.381±7.91 10.351±1.38
ENSMUST00000167246 8.747±2.18 19.885±0.96 14.232±2.36 37.867±7.05 5.144±2.52 12.516±1.56 3.712±0.77 11.182±1.75 9.395±2.67 9.547±1.35 2.464±0.77 25.301±4.59 8.075±3.79 15.070±6.95
ENSMUSG00000073051 ENSMUST00000156494 0.093±0.06 0.124±0.09 0.077±0.02 0.006±0.00 0.065±0.03 0.130±0.03 0.026±0.01 0.060±0.02 0.018±0.02 0.140±0.01 0.020±0.00 0.120±0.06 0.009±0.01 0.247±0.05
ENSMUSG00000085053 ENSMUST00000152025 0.092±0.05 0.151±0.00 0.020±0.01 0.038±0.00 0.139±0.07 N/A N/A 0.066±0.00 0.026±0.00 0.092±0.00 N/A 0.336±0.26 0.018±0.00 0.460±0.10
ENSMUSG00000085553 ENSMUST00000129259 0.154±0.00 0.378±0.09 0.042±0.00 0.037±0.00 N/A N/A 0.146±0.00 0.181±0.06 0.039±0.01 0.152±0.00 N/A 0.688±0.38 0.052±0.03 0.220±0.07

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