C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: short chain dehydrogenase/reductase family 42E, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000328945 SDR42E1-001 ENSG00000184860 9606 - 16:81988855-82011488 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000328945
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000328945 0.137±0.00 0.196±0.00 0.358±0.00 0.016±0.01 0.342±0.00 0.354±0.08 0.031±0.02 0.628±0.36 0.334±0.00 0.005±0.00 0.472±0.35 0.039±0.01 0.973±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Z3 CIL_0001Z3_0001 CGP 16:81739097-82011488
CIL_0001X5 CIL_0001X5_0001 CGP 16:81988855-82098534

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0003854 IEA 3-beta-hydroxy-delta5-steroid dehydrogenase activity
GO:0006694 IEA steroid biosynthetic process
GO:0009058 IEA biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0050662 IEA coenzyme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173522 Sdr42e1-001 protein_coding Mus_musculus 0 894
ENSMUST00000037955 Sdr42e1-003 protein_coding Mus_musculus 0 891

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