C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001Z3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197943-ENSG00000184860 CGP 9606 16:81739097-82011488
GeneTranscriptPositionBiotype
ENSG00000184860 (SDR42E1)
short chain dehydrogenase/reductase family 42E, member 1 		ENST00000328945 (SDR42E1-001) 81988855-82011488 protein_coding
ENST00000532128 (SDR42E1-002) 81999699-82011481 protein_coding
ENST00000534209 (SDR42E1-003) 81999755-82011465 processed_transcript
ENSG00000197943 (PLCG2)
phospholipase C, gamma 2 (phosphatidylinositol-specific) 		ENST00000359376 (PLCG2-201) 81785990-81958020 protein_coding
ENST00000562605 (PLCG2-016) 81889339-81900780 processed_transcript
ENST00000563193 (PLCG2-009) 81883269-81898656 protein_coding
ENST00000563269 (PLCG2-012) 81931261-81936210 retained_intron
ENST00000563375 (PLCG2-008) 81891531-81906384 nonsense_mediated_decay
ENST00000563834 (PLCG2-014) 81938478-81939962 processed_transcript
ENST00000564138 (PLCG2-001) 81779258-81962693 protein_coding
ENST00000565020 (PLCG2-007) 81857945-81859269 retained_intron
ENST00000565054 (PLCG2-002) 81739097-81859163 protein_coding
ENST00000565400 (PLCG2-005) 81798466-81869233 processed_transcript
ENST00000567356 (PLCG2-015) 81938628-81956730 retained_intron
ENST00000567373 (PLCG2-013) 81937347-81940059 retained_intron
ENST00000567980 (PLCG2-003) 81785746-81921610 retained_intron
ENST00000569523 (PLCG2-006) 81842720-81869277 processed_transcript
ENST00000569929 (PLCG2-004) 81779342-81883591 retained_intron
ENST00000570196 (PLCG2-011) 81923415-81928831 retained_intron
ENST00000570198 (PLCG2-010) 81895619-81905487 retained_intron
ENSG00000260682 (7SK)
7SK RNA 		ENST00000363673 (7SK.1-201) 81961926-81962243 misc_RNA
CIL_0001Z3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034330-ENSMUSG00000034308 CGP 10090 8:117498291-117673689
GeneTranscriptPositionBiotype
ENSMUSG00000034308 (Sdr42e1)
short chain dehydrogenase/reductase family 42E, member 1 		ENSMUST00000037955 (Sdr42e1-003) 117661399-117671547 protein_coding
ENSMUST00000173522 (Sdr42e1-001) 117661402-117673689 protein_coding
ENSMUST00000174450 (Sdr42e1-002) 117663333-117673689 protein_coding
ENSMUSG00000034330 (Plcg2)
phospholipase C, gamma 2 		ENSMUST00000081232 (Plcg2-201) 117498291-117635140 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Z3_0001ENSG00000184860ENST00000328945ENST00000532128ENST00000534209ENSG00000197943ENST00000359376ENST00000562605ENST00000563193ENST00000563269ENST00000563375ENST00000563834ENST00000564138ENST00000565020ENST00000565054ENST00000565400ENST00000567356ENST00000567373ENST00000567980ENST00000569523ENST00000569929ENST00000570196ENST00000570198ENSG00000260682ENST00000363673CIL_0001Z3_0002ENSMUSG00000034308ENSMUST00000037955ENSMUST00000173522ENSMUST00000174450ENSMUSG00000034330ENSMUST00000081232
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Z3_0001ENSG00000184860ENST00000328945ENST00000534209ENSG00000197943ENST00000359376ENST00000563269ENST00000564138ENST00000567356ENST00000567980ENSG00000260682ENST00000363673CIL_0001Z3_0002ENSMUSG00000034308ENSMUST00000037955ENSMUST00000173522ENSMUST00000174450ENSMUSG00000034330ENSMUST00000081232
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000184860 ENST00000328945 0.137±0.00 0.196±0.00 0.358±0.00 0.016±0.01 0.342±0.00 0.354±0.08 0.031±0.02 0.628±0.36 0.334±0.00 N/A 0.005±0.00 0.472±0.35 0.039±0.01 0.973±0.00
ENST00000532128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534209 N/A N/A N/A N/A N/A 1.350±0.00 0.310±0.00 N/A 0.803±0.00 0.315±0.00 N/A N/A 0.324±0.06 N/A
ENSG00000197943 ENST00000359376 7.048±0.00 17.569±0.00 3.316±0.00 0.632±0.47 3.681±1.48 2.292±0.46 0.655±0.04 6.693±5.13 1.592±0.53 3.709±1.31 0.878±0.00 1.608±0.56 5.055±1.01 1.916±0.68
ENST00000562605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563269 N/A N/A N/A N/A N/A N/A N/A 4.872±0.00 N/A N/A N/A N/A N/A N/A
ENST00000563375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564138 0.981±0.00 6.144±0.00 1.042±0.00 0.155±0.09 1.220±0.00 0.414±0.02 0.098±0.00 0.289±0.00 0.121±0.00 N/A 0.112±0.00 0.312±0.09 0.732±0.00 0.645±0.00
ENST00000565020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567356 N/A N/A N/A 0.744±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 8.869±0.00 N/A
ENST00000567373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567980 N/A N/A N/A N/A N/A 0.716±0.00 N/A N/A N/A N/A 0.108±0.00 N/A N/A N/A
ENST00000569523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260682 ENST00000363673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.793±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034308 ENSMUST00000037955 N/A 0.143±0.00 N/A 1.350±0.00 N/A N/A 0.157±0.00 N/A 1.756±0.00 N/A N/A 0.479±0.13 2.066±0.70 0.362±0.00
ENSMUST00000173522 4.438±1.43 1.151±0.23 23.537±6.50 0.407±0.03 5.425±0.74 13.865±0.94 1.128±0.46 3.311±0.44 36.446±33.10 3.709±1.24 0.209±0.03 2.528±0.43 5.276±2.14 1.539±0.68
ENSMUST00000174450 N/A N/A N/A N/A N/A N/A 0.767±0.03 N/A N/A N/A 0.238±0.00 1.008±0.04 N/A N/A
ENSMUSG00000034330 ENSMUST00000081232 1.669±0.59 2.504±0.46 3.808±0.26 0.536±0.32 8.674±3.91 3.013±0.55 1.394±0.46 4.193±1.08 2.151±1.81 5.771±0.17 0.349±0.33 2.935±0.89 4.642±2.76 1.698±1.76

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