C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185052 SLC24A3 9606 + 20:19212646-19722937 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328041 SLC24A3-001 19212646-19722937 protein_coding
  ENST00000613834 SLC24A3-201 19212843-19722899 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328041ENST00000613834
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328041 0.179±0.00 0.362±0.00 N/A 2.309±0.58 3.316±0.25 2.167±0.00 0.497±0.00 1.243±0.00 1.549±1.41 1.042±0.91 2.419±0.14 2.823±1.57 3.608±1.52 1.455±0.00
ENST00000613834 1.080±0.00 2.307±0.00 0.190±0.00 7.620±0.00 12.418±0.00 2.736±2.14 0.077±0.00 N/A N/A 2.013±0.00 0.759±0.00 6.249±5.28 3.550±0.00 7.101±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MZ CIL_0002MZ_0001 CGP 20:18813726-19722937
CIL_0002MY CIL_0002MY_0001 CGP 20:19212646-20002457

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006813 IEA potassium ion transport
GO:0006816 IEA calcium ion transport
GO:0008273 IEA calcium, potassium:sodium antiporter activity
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006760 slc24a3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein_coding Danio_rerio
ENSMUSG00000063873 Slc24a3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein_coding Mus_musculus

Loading