C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002MZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132631-ENSG00000185052 CGP 9606 20:18813726-19722937
GeneTranscriptPositionBiotype
ENSG00000132631 (SCP2D1)
SCP2 sterol-binding domain containing 1 		ENST00000377428 (SCP2D1-001) 18813726-18814392 protein_coding
ENSG00000149443 (C20orf78)
chromosome 20 open reading frame 78 		ENST00000278779 (C20orf78-201) 18809728-18830195 protein_coding
ENST00000463425 (C20orf78-002) 18809728-18811716 sense_overlapping
ENST00000623418 (C20orf78-001) 18809728-18830153 sense_overlapping
ENSG00000179447 (RP5-1027G4.3)
 ENST00000319682 (RP5-1027G4.3-001) 19242302-19284596 antisense
ENSG00000185052 (SLC24A3)
solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 		ENST00000328041 (SLC24A3-001) 19212646-19722937 protein_coding
ENST00000613834 (SLC24A3-201) 19212843-19722899 protein_coding
ENSG00000221748 (AL049647.1)
 ENST00000408821 (AL049647.1-201) 19341296-19341372 miRNA
ENSG00000264669 (AL136090.1)
 ENST00000584556 (AL136090.1-201) 19125785-19125907 miRNA
ENSG00000274863 (RP11-97N19.3)
 ENST00000617956 (RP11-97N19.3-001) 19000709-19056796 lincRNA
CIL_0002MZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027431-ENSMUSG00000063873 CGP 10090 2:144823656-145642166
GeneTranscriptPositionBiotype
ENSMUSG00000027431 (Scp2d1)
SCP2 sterol-binding domain containing 1 		ENSMUST00000028918 (Scp2d1-001) 144823656-144824415 protein_coding
ENSMUSG00000063873 (Slc24a3)
solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 		ENSMUST00000081121 (Slc24a3-201) 145244972-145640361 protein_coding
ENSMUST00000110007 (Slc24a3-001) 145167754-145642166 protein_coding
ENSMUST00000131123 (Slc24a3-003) 145606818-145614160 processed_transcript
ENSMUST00000137908 (Slc24a3-004) 145242611-145642166 processed_transcript
ENSMUST00000153249 (Slc24a3-002) 145167919-145518947 processed_transcript
ENSMUSG00000074753 (Gm14092)
predicted gene 14092 		ENSMUST00000136794 (Gm14092-001) 145550652-145554982 antisense
ENSMUSG00000084178 (Gm11759)
predicted gene 11759 		ENSMUST00000121742 (Gm11759-001) 145510194-145510657 processed_pseudogene
ENSMUSG00000087158 (Gm14093)
predicted gene 14093 		ENSMUST00000145579 (Gm14093-001) 145337648-145379381 sense_intronic
ENSMUSG00000088213 (Gm22390)
predicted gene, 22390 		ENSMUST00000157588 (Gm22390-201) 145481407-145481731 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002MZ_0001ENSG00000132631ENST00000377428ENSG00000149443ENST00000278779ENST00000463425ENST00000623418ENSG00000179447ENST00000319682ENSG00000185052ENST00000328041ENST00000613834ENSG00000221748ENST00000408821ENSG00000264669ENST00000584556ENSG00000274863ENST00000617956CIL_0002MZ_0002ENSMUSG00000027431ENSMUST00000028918ENSMUSG00000063873ENSMUST00000081121ENSMUST00000110007ENSMUST00000131123ENSMUST00000137908ENSMUST00000153249ENSMUSG00000074753ENSMUST00000136794ENSMUSG00000084178ENSMUST00000121742ENSMUSG00000087158ENSMUST00000145579ENSMUSG00000088213ENSMUST00000157588
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002MZ_0001ENSG00000132631ENST00000377428ENSG00000149443ENST00000278779ENST00000463425ENST00000623418ENSG00000179447ENST00000319682ENSG00000185052ENST00000328041ENST00000613834ENSG00000221748ENST00000408821ENSG00000264669ENST00000584556ENSG00000274863ENST00000617956CIL_0002MZ_0002ENSMUSG00000027431ENSMUST00000028918ENSMUSG00000063873ENSMUST00000081121ENSMUST00000110007ENSMUST00000137908ENSMUSG00000074753ENSMUST00000136794ENSMUSG00000084178ENSMUST00000121742ENSMUSG00000087158ENSMUST00000145579ENSMUSG00000088213ENSMUST00000157588
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132631 ENST00000377428 0.044±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.865±3.30
ENSG00000149443 ENST00000278779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.048±0.00
ENST00000463425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.120±0.00 N/A N/A
ENST00000623418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.767±0.23
ENSG00000179447 ENST00000319682 0.015±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.154±0.11 N/A 0.040±0.00 0.056±0.00 0.134±0.03
ENSG00000185052 ENST00000328041 0.179±0.00 0.362±0.00 N/A 2.309±0.58 3.316±0.25 2.167±0.00 0.497±0.00 1.243±0.00 1.549±1.41 1.042±0.91 2.419±0.14 2.823±1.57 3.608±1.52 1.455±0.00
ENST00000613834 1.080±0.00 2.307±0.00 0.190±0.00 7.620±0.00 12.418±0.00 2.736±2.14 0.077±0.00 N/A N/A 2.013±0.00 0.759±0.00 6.249±5.28 3.550±0.00 7.101±0.00
ENSG00000221748 ENST00000408821 N/A 1.700±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264669 ENST00000584556 N/A 0.108±0.00 N/A 0.313±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274863 ENST00000617956 N/A 0.041±0.00 N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A 0.149±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027431 ENSMUST00000028918 N/A N/A N/A N/A 0.118±0.04 N/A 0.092±0.05 0.120±0.00 N/A N/A N/A N/A 0.016±0.01 107.480±62.38
ENSMUSG00000063873 ENSMUST00000081121 11.908±1.61 N/A N/A 49.577±47.58 4.732±0.51 N/A 0.502±0.10 0.982±0.26 0.112±0.04 2.315±0.40 0.195±0.00 9.642±5.72 2.072±2.25 4.109±3.73
ENSMUST00000110007 5.640±0.91 1.169±0.42 19.051±3.05 7.323±7.46 1.857±0.74 3.565±1.07 0.383±0.14 0.386±0.09 0.168±0.10 1.388±0.25 0.271±0.00 2.910±0.99 0.717±0.38 1.385±0.40
ENSMUST00000131123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137908 16.940±2.38 8.107±0.80 15.852±3.14 3.763±0.88 8.677±3.99 9.539±2.29 1.026±0.35 1.173±0.49 0.249±0.22 4.805±1.03 0.368±0.11 10.135±3.32 0.995±0.72 1.819±0.64
ENSMUST00000153249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000074753 ENSMUST00000136794 0.150±0.06 N/A 0.016±0.00 N/A 0.087±0.00 N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 0.558±0.23
ENSMUSG00000084178 ENSMUST00000121742 0.309±0.18 N/A 0.023±0.00 0.006±0.00 N/A N/A N/A N/A 0.072±0.00 0.150±0.00 N/A 0.531±0.20 0.098±0.00 0.127±0.00
ENSMUSG00000087158 ENSMUST00000145579 N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.562±0.34
ENSMUSG00000088213 ENSMUST00000157588 0.361±0.08 N/A N/A 0.128±0.08 N/A N/A N/A N/A N/A N/A N/A 0.215±0.00 N/A N/A

Loading