C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000328041 SLC24A3-001 ENSG00000185052 9606 + 20:19212646-19722937 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328041
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328041 0.179±0.00 0.362±0.00 2.309±0.58 3.316±0.25 2.167±0.00 0.497±0.00 1.243±0.00 1.549±1.41 1.042±0.91 2.419±0.14 2.823±1.57 3.608±1.52 1.455±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MZ CIL_0002MZ_0001 CGP 20:18813726-19722937
CIL_0002MY CIL_0002MY_0001 CGP 20:19212646-20002457

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006813 IEA potassium ion transport
GO:0006816 IEA calcium ion transport
GO:0008273 IEA calcium, potassium:sodium antiporter activity
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110007 Slc24a3-001 protein_coding Mus_musculus 0 3742
ENSMUST00000137908 Slc24a3-004 processed_transcript Mus_musculus 0 3314
ENSMUST00000081121 Slc24a3-201 protein_coding Mus_musculus 0 2235
ENSMUST00000153249 Slc24a3-002 processed_transcript Mus_musculus 0 449
ENSMUST00000131123 Slc24a3-003 processed_transcript Mus_musculus 0 261

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