C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063873 Slc24a3 10090 + 2:145167754-145642166 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081121 Slc24a3-201 145244972-145640361 protein_coding
  ENSMUST00000110007 Slc24a3-001 145167754-145642166 protein_coding
  ENSMUST00000131123 Slc24a3-003 145606818-145614160 processed_transcript
  ENSMUST00000137908 Slc24a3-004 145242611-145642166 processed_transcript
  ENSMUST00000153249 Slc24a3-002 145167919-145518947 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081121ENSMUST00000110007ENSMUST00000137908
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081121 11.908±1.61 N/A N/A 49.577±47.58 4.732±0.51 N/A 0.502±0.10 0.982±0.26 0.112±0.04 2.315±0.40 0.195±0.00 9.642±5.72 2.072±2.25 4.109±3.73
ENSMUST00000110007 5.640±0.91 1.169±0.42 19.051±3.05 7.323±7.46 1.857±0.74 3.565±1.07 0.383±0.14 0.386±0.09 0.168±0.10 1.388±0.25 0.271±0.00 2.910±0.99 0.717±0.38 1.385±0.40
ENSMUST00000137908 16.940±2.38 8.107±0.80 15.852±3.14 3.763±0.88 8.677±3.99 9.539±2.29 1.026±0.35 1.173±0.49 0.249±0.22 4.805±1.03 0.368±0.11 10.135±3.32 0.995±0.72 1.819±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MZ CIL_0002MZ_0002 CGP 2:144823656-145642166
CIL_0002MY CIL_0002MY_0002 CGP 2:145167754-145887616

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0006813 IEA potassium ion transport
GO:0006816 IEA calcium ion transport
GO:0006874 TAS cellular calcium ion homeostasis
GO:0008273 IDA calcium, potassium:sodium antiporter activity
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0035725 IDA sodium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006760 slc24a3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein_coding Danio_rerio
ENSG00000185052 SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein_coding Homo_sapiens

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