C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tumor necrosis factor, alpha-induced protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185215 TNFAIP2 9606 + 14:103123442-103137439 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333007 TNFAIP2-201 103126327-103137439 protein_coding
  ENST00000558056 TNFAIP2-006 103123461-103126575 protein_coding
  ENST00000559195 TNFAIP2-007 103123442-103130033 processed_transcript
  ENST00000559255 TNFAIP2-005 103132748-103136682 protein_coding
  ENST00000559406 TNFAIP2-003 103126389-103135651 nonsense_mediated_decay
  ENST00000560428 TNFAIP2-008 103127566-103131762 retained_intron
  ENST00000560562 TNFAIP2-002 103126389-103135651 nonsense_mediated_decay
  ENST00000560670 TNFAIP2-004 103127576-103135650 protein_coding
  ENST00000560869 TNFAIP2-001 103123461-103137439 protein_coding
  ENST00000561156 TNFAIP2-009 103131096-103133765 nonsense_mediated_decay
  ENST00000561217 TNFAIP2-010 103136403-103137432 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333007ENST00000559195ENST00000559255ENST00000559406ENST00000560670ENST00000560869ENST00000561217
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333007 1.493±0.00 N/A 0.407±0.00 0.634±0.00 3.060±0.84 2.397±0.00 1.009±0.55 4.368±0.00 2.057±0.00 6.003±3.23 1.084±0.00 4.234±2.71 8.826±1.10 2.213±0.00
ENST00000559195 N/A N/A 1.775±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559255 4.912±0.00 N/A N/A 1.173±0.00 11.765±0.00 N/A N/A N/A N/A N/A N/A 12.370±10.84 25.132±0.00 13.606±7.79
ENST00000559406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.058±0.00 N/A N/A 5.350±0.00
ENST00000560670 N/A N/A N/A N/A N/A N/A 0.743±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000560869 4.515±0.00 10.081±0.00 N/A N/A 7.767±0.00 1.224±0.83 1.861±1.51 2.378±0.00 1.310±0.69 12.186±9.77 0.851±0.00 3.753±2.65 3.189±0.95 1.730±0.00
ENST00000561217 N/A N/A N/A 1.958±0.00 9.693±0.00 4.194±0.00 N/A N/A N/A N/A N/A 24.484±6.81 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OP CIL_0000OP_0001 CGP 14:103100144-103137439
CIL_0001AI CIL_0001AI_0002 CGP 14:103123442-103345025

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000145 IEA exocyst
GO:0001525 IEA angiogenesis
GO:0005615 TAS extracellular space
GO:0006887 IEA exocytosis
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043416 tnfaip2a tumor necrosis factor, alpha-induced protein 2a protein_coding Danio_rerio
ENSDARG00000058160 tnfaip2b tumor necrosis factor, alpha-induced protein 2b protein_coding Danio_rerio
ENSDARG00000094072 tnfaip2b tumor necrosis factor, alpha-induced protein 2b protein_coding Danio_rerio
ENSMUSG00000021281 Tnfaip2 tumor necrosis factor, alpha-induced protein 2 protein_coding Mus_musculus

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